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13_1_20cm_3_scaffold_3684_3

Organism: 13_1_20CM_3_Actinobacteria_68_9

near complete RP 43 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 9 / 38
Location: 934..2082

Top 3 Functional Annotations

Value Algorithm Source
rpoE; RNA polymerase sigma-70 factor, ECF subfamily Tax=RBG_19FT_COMBO_Actinobacteria_70_19_curated UNIPROT
DB: UniProtKB
  • Identity: 62.4
  • Coverage: 372.0
  • Bit_score: 435
  • Evalue 1.10e-118
RNA polymerase ECF-subfamily sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14629878 bin=bin8_Chloro species=Actinomadura madurae genus=Actinomadura taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin8_Chloro organism_group=Chloroflexi similarity UNIREF
DB: UNIREF100
  • Identity: 62.1
  • Coverage: 380.0
  • Bit_score: 426
  • Evalue 2.10e-116
ECF family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 378.0
  • Bit_score: 398
  • Evalue 2.30e-108

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Taxonomy

RBG_19FT_COMBO_Actinobacteria_70_19_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 1149
GTGCAGGAGGCGTTCGTCGTCGCCCTCGAGCGCTGGCCTCGCGACGGGACTCCTGACAACCCGGGTGCCTGGATCACCCGTGTCGCTCGCAACAAGGCGATCGATCGCATGCGCCGCGAGCGCACGCTGCTGGAGAAACGGGCCGTCCTCGAGCGCCTCGAAGCGCTCGAGACCCAGGCTGCTCCGGAGGGTGCGGACGATGAGCTCCCCGACGACCGCCTGCGCCTGATCTTCACCTGCTGCCACCCCGCGCTGGCGCCGGAGGCGCGGGTCGCGCTCACGCTGCGAACGCTCGGCGGCCTCACAACCGTCGAGATCGCCCGGGCCTTTCTGGTCGCCGAGGCGACCATGGCGCAGCGGCTCGTGCGCGCTAAGCGCAAGATCCGCGACGCGGGCATCCCGTACGAGGTGCCCACCGGCGAACGGCTGGCGGAGCGGCTGCCGTCGGTGCTGGCGACCTTGTACCTGGTGTTCAACGAGGGCTATCTGGCGTCCGAGTCCGATGCGCTGATCCGGCGCGAGCTTTGCGCCGAGGCGATCCGGCTGGCGCGGATTCTGGCGGCGATGATGCCCCGGGAGGCGGAGGTGGACGGGCTGGCGGCGCTGATGCTCCTGCAGGACTCCCGTCGCGCCGCGCGCGTCGATACCGAGGGACGCATGGTGCTGCTGGAGGATCAGGATCGGTCGCTGTGGGACCGCGACGAGATCGCCGAGGGGCTCGCATTCGTGCGCCGCGCGTCCGCGCGACAGCCGCCCGGGCCGTACACGCTGCAGGCAGCGATCGCCGCGGAGCACGCTCGGGCGAAGGCCGCGAATGCGACCGATTGGATGCGGATCCGCCGTCTCTACGACTGGCTCGCCATCGTCCAGCCTTCTCCGGTGATCGAGTTGAACCGAGCGGTCGCCGCCGCGATGAGCGAGGGGCCCGAGCGTGGCCTCGAGCTGATCGGCCTCATCGAGGGCCTCGACTCCTACCAGCACCTCCACTCGGCGCGGGCCGAGCTCCTGCGACGCGCCGGCCGAGGCGAGGAGGCGGCCGCCGCGTACGGCCGCGCTCTCGACCTGGCGACCAACCCCGTGGAGCGCGCTTTTCTTACGAAGCGGCTCGCCGAGTCGAAACGCGCGACCACGGCGCCCAGACGGTCGTGA
PROTEIN sequence
Length: 383
VQEAFVVALERWPRDGTPDNPGAWITRVARNKAIDRMRRERTLLEKRAVLERLEALETQAAPEGADDELPDDRLRLIFTCCHPALAPEARVALTLRTLGGLTTVEIARAFLVAEATMAQRLVRAKRKIRDAGIPYEVPTGERLAERLPSVLATLYLVFNEGYLASESDALIRRELCAEAIRLARILAAMMPREAEVDGLAALMLLQDSRRAARVDTEGRMVLLEDQDRSLWDRDEIAEGLAFVRRASARQPPGPYTLQAAIAAEHARAKAANATDWMRIRRLYDWLAIVQPSPVIELNRAVAAAMSEGPERGLELIGLIEGLDSYQHLHSARAELLRRAGRGEEAAAAYGRALDLATNPVERAFLTKRLAESKRATTAPRRS*