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13_1_20cm_3_scaffold_5194_1

Organism: 13_1_20CM_3_Actinobacteria_68_9

near complete RP 43 / 55 MC: 1 BSCG 46 / 51 MC: 1 ASCG 9 / 38
Location: comp(3..593)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI00036B1007 similarity UNIREF
DB: UNIREF100
  • Identity: 68.4
  • Coverage: 196.0
  • Bit_score: 269
  • Evalue 2.20e-69
RNA polymerase sigma70 factor {ECO:0000313|EMBL:AJK57624.1}; TaxID=1460371 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis lurida NRRL UNIPROT
DB: UniProtKB
  • Identity: 62.0
  • Coverage: 200.0
  • Bit_score: 245
  • Evalue 4.80e-62
RNA polymerase sigma70 factor similarity KEGG
DB: KEGG
  • Identity: 62.0
  • Coverage: 200.0
  • Bit_score: 245
  • Evalue 9.70e-63

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Taxonomy

Amycolatopsis lurida → Amycolatopsis → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 591
GTGACCGAGCAGACCCTGGGGCGTGCGCGCGCCGGCGACGAGAACGCGTTCCGCGAGCTGACCGATCCCTACCGGCGTGAGCTCCAACTGCACATCTACCGGATCGTCGGCTCGACTCAGGACGCCGAGGACCTGGTCCAAGAGACGCTGCTCGCGGCGTGGCGCGGCCTCGAGCAGTTCGAGGGTCGCGCGTCCGTCCGTGCGTGGCTGTACCGCATCGCCACCAATCGTTCGCTGGATACCCTGCGTGCGAGCCGGCGCCGGCCGGAAGACCTGCTGCGGATGACCGAGGTGCCCGAGCCGACTCGTCGGGTCGAACCAATCTGGCTTGAGCCCTATGCGGACGCCCTGCTCGAGGGGGTCCCGGACGACGCTCCCGGACCGGAGGCGCGTTACGAGACCAGGGAGGCGATCGCGCTGGCGTTCATCGTCGGCCTTCAGCATCTTCCGCCGCAGCAGCGCGCGGTACTCGTGCTGCGCGACGTGCTGGGCTACCGCGCCGGGGAGGTCGCCGAGATGCTCGATTCAACCGAGGCCTCGGTCAACAACCTCCTGCGCCGCGCGCGGGCGGCATTTGAGTCCCGCCTACCG
PROTEIN sequence
Length: 197
VTEQTLGRARAGDENAFRELTDPYRRELQLHIYRIVGSTQDAEDLVQETLLAAWRGLEQFEGRASVRAWLYRIATNRSLDTLRASRRRPEDLLRMTEVPEPTRRVEPIWLEPYADALLEGVPDDAPGPEARYETREAIALAFIVGLQHLPPQQRAVLVLRDVLGYRAGEVAEMLDSTEASVNNLLRRARAAFESRLP