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13_1_20cm_3_scaffold_4449_6

Organism: 13_1_20CM_3_Actinobacteria_70_7

partial RP 34 / 55 MC: 5 BSCG 31 / 51 MC: 3 ASCG 8 / 38 MC: 1
Location: comp(6310..7281)

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF-subfamily sigma factor n=1 Tax=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 / MA-4680) RepID=Q82K07_STRAW similarity UNIREF
DB: UNIREF100
  • Identity: 36.5
  • Coverage: 233.0
  • Bit_score: 133
  • Evalue 3.10e-28
Putative RNA polymerase ECF-subfamily sigma factor {ECO:0000313|EMBL:BAC70308.1}; TaxID=227882 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomy UNIPROT
DB: UniProtKB
  • Identity: 36.5
  • Coverage: 233.0
  • Bit_score: 133
  • Evalue 4.40e-28
sig20; ECF subfamily RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 36.5
  • Coverage: 233.0
  • Bit_score: 133
  • Evalue 8.80e-29

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Taxonomy

Streptomyces avermitilis → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 972
TTGCGCACCACCTGGACGGCGGCCGCCCTCGCGGCGTCCGCGCTCGCCGTTCTCACCAGTGGCGCCGCTTCGGCCGCGACCGGGGGAACGCTGCCGCATCGTGCCGAATCGACCGCGGTTCACGCCGTGGCCGGACACTGGGTCACTCCGCAACCGGGCTTCCTCGGGGGCGAATGGCTGCTGTTCCATCGCGGGGACACCGTCACCGTGCAGGGGCGGGGCTATTTCGTGGTGCGCTGGGAGATCGAGTACTGGCGGGGCACCGGGGTCGTGTCCATGCCCACGTTCACCGGCCAGCAGGGGACCTTCCTGCACGTGGCCTCCGCCGGCCACCCGATGGACATGCCGGTGCCGAAAGGCGAACCGGGCCAGACCTGGATGGGCAAGCCGTCAATGGGCTTCGAGACCCTGCCCGCGGGAACGCCCATGGTCTGGTTGAACGAGTACTACTACCTGGACGGCACGGTCACGATCACGTGCCAGGAGGCGGAGAACGGGCAGAACGGCCGCTACAACGTGGGCGTCGCGCCCAAGACCTGGCAGCAGGTCGACAGCGACGTTCATCCGCCGAAGAACGGCACCGCCGGGTTGGTATTGGATCCGGGCCCGACGGCCTCCCCATCGACGTCGGCCTCGGTCACCCCCGCGCCAAGCTCCGCTCCGAGGTCCAGCAAGAGCACAGCGCCTCGAACGCCCACGACCACCACCACTCCCCGCTCGGCCCCGCCCACCACGACCGCTCCGGTGACCCCAGACCCCGCCACGGTCGGAACATCGGCCACGACAGGATCCACGACGACACAAGACCTGGCTGACACCGCGGGCTCCGCACAGCCCGCCCAGACGAAGGGCAGTTCCATCGGCCTGCTGCTGGCCGCCGCCGGATGCGGGCTGGCAGCACTGATCGCCGTCATCCTGTGGCGCCGGCGACGCCGCGACGACACCACCGACAGGCGTGCACCCGGTCGGTGA
PROTEIN sequence
Length: 324
LRTTWTAAALAASALAVLTSGAASAATGGTLPHRAESTAVHAVAGHWVTPQPGFLGGEWLLFHRGDTVTVQGRGYFVVRWEIEYWRGTGVVSMPTFTGQQGTFLHVASAGHPMDMPVPKGEPGQTWMGKPSMGFETLPAGTPMVWLNEYYYLDGTVTITCQEAENGQNGRYNVGVAPKTWQQVDSDVHPPKNGTAGLVLDPGPTASPSTSASVTPAPSSAPRSSKSTAPRTPTTTTTPRSAPPTTTAPVTPDPATVGTSATTGSTTTQDLADTAGSAQPAQTKGSSIGLLLAAAGCGLAALIAVILWRRRRRDDTTDRRAPGR*