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13_1_20cm_3_scaffold_938_21

Organism: 13_1_20CM_3_Actinobacteria_70_7

partial RP 34 / 55 MC: 5 BSCG 31 / 51 MC: 3 ASCG 8 / 38 MC: 1
Location: comp(12560..16357)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 999.99
  • Bit_score: 2154
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Catenulispora acidiphila (strain DSM 44928 / NRRL B-24433 / NBRC 102108 / JCM 14897) RepID=C7Q2K8_CATAD similarity UNIREF
DB: UNIREF100
  • Identity: 86.8
  • Coverage: 999.99
  • Bit_score: 2155
  • Evalue 0.0
  • rbh
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 999.99
  • Bit_score: 2154
  • Evalue 0.0
  • rbh

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Taxonomy

Catenulispora acidiphila → Catenulispora → Catenulisporales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 3798
GTGCTTGACGTCAATTTCTTCGACGAGCTCCGTATCGGTCTGGCGACCGCCGACGACATCCGTACCTGGTCCTACGGCGAGGTGAAGAAGCCGGAGACCATCAACTACCGCACCCTGAAGCCGGAGAAGGACGGGCTCTTCTGCGAGAAGATCTTCGGCCCCACCCGGGACTGGGAGTGCTACTGCGGCAAGTACAAGCGCGTCCGGTTCAAGGGCATCATCTGCGAGCGCTGCGGCGTGGAGGTCACGCGGGCCAAGGTGCGCCGCGAGCGGATGGGCCACATCGAGCTGGCCGCGCCGGTGACCCACATCTGGTACTTCAAGGGCGTGCCGTCCCGGCTGGGCTACCTGCTGGACCTGGCGCCGAAGGACCTGGAGAAGGTCATCTACTTCGCCGCCTACATGATCACCGAGGTCGACGACGAGCGCCGCACCCGGGACCTGCCCTCGCTGGAGGCCAAGGTCTCGGTGGAGCGCCAGCAGGTCGAGAACCGGCGCGACGCCGACGTCGAGGCCCGGCAGAAGAAGCTGGAGGAGGACCTGGCGGCCCTGGAGGCCGAGGGCGCCAAGGCCGACCAGCGCCGCAAGGTCCGCGAGGGCGGCGAGCGGGAGATGAAGCAGCTGCGCGACCGCGCGCAGCGCGAGATCGACCGCCTGGACGAGGTGTGGAGCCGGTTCAAGTCGCTCAAGGTCCAGGACCTGGAGGGCGACGAGATCCTGTACCGGGAGATGCGTGACCGCTACGGCACGTACTTCTCCGGGTCCATGGGCGCCGCCGCGCTGCAGAAGCGGCTGGAGGACTTCGACCTGGACGCCGAGGCGGAGTCGCTGCGCGAGACCATCCGCACCGGCAAGGGCCAGAAGAAGACCCGCGCCCTGAAGCGGCTGAAGGTCGTCGAGGCCTTCCGGTCCACCAACAACTCGCCGTCCGGCATGGTGCTGGACTGCGTGCCCGTGATCCCGCCGGACCTGCGTCCGATGGTGCAGCTGGACGGCGGCCGTTTCGCGACCTCCGATCTGAACGACCTGTACCGCCGGGTGATCAACCGGAACAACCGGCTCAAGCGGCTGCTGGACCTGGGCGCGCCGGAGATCATCGTCAACAACGAGAAGCGGATGCTGCAGGAGGCCGTGGACTCGCTGTTCGACAACGGCCGCCGCGGCCGTCCGGTCACAGGCCCCGGCAACCGTCCGCTGAAGTCGCTGTCCGACATGCTCAAGGGCAAGCAGGGCCGGTTCCGCCAGAACCTGCTGGGCAAGCGCGTCGACTACTCGGCCCGTTCGGTCATCGTGGTCGGCCCGCAGCTGAAGCTGCACCAGTGCGGTCTGCCCAAGCAGATGGCGCTGGAGCTGTTCAAGCCCTTCGTCATGAAGCGGCTGGTGGACCTGAACCACGCGCAGAACATCAAGTCCGCCAAGCGGATGGTGGAGCGCGCCTTCGAGCCGCAGCTGGTCGAGGGCAAGGCGATCCAGATCCACCCGCTGGTCTGCACCGCGTTCAACGCGGACTTCGACGGCGACCAGATGGCGGTGCCCCTGCCGCTGTCCGCCGAGGCGCAGGCCGAGGCCCGGGTCCTGATGCTGTCCTCGAACAACATCCTGTCCCCGGCGCACGGCCGGCCGATCACCTCGCCGACGCAGGACATGGTCCTGGGTCTGTTCTTCCTGACCATGGACCGGGACGGGATGAAGGGCGAGGGCCGGGCGTTCGGCTCGATCGCCGAGGGCATGATGGCCTTCGACAACCGCGAGCTGGACCTGCAGGCCCCGATCGAGCTGCGGATCTCCGAGGCGGTGCCGCCGCGCGGCTGGGAGGCGCCGGAGGGCTGGGAGACCGGCCAGCCGTTCCGCCTGAAGACCACGCTGGGCCGGGCGCTGTTCAACGAGCTGCTGCCGCTGGACTACCCGTACGAGAACCGCGAGGTGGCCAAGAAGCAGCTCTCGGCGATCGTCAACGACCTGGCCGAGCGCTACCCGAAGGTCACGGTCGCGGCGACTCTGGACAACCTGAAGTCCTCGGGCTTCTACTGGGCCACCCGCTCCGGCGTCACGGTGTCCGTCGAGGACATCGTCGTGCCGCCGAAGAAGGGCGAGATCCTCGAGGGGTACGAGTCCCAGGCCGCCAAGATCCAGAAGCAGTACGAGCGCGGCCTGGTCACCAAGGAGGAGCGGAACCAGGAGCTGATCTCCATCTGGACCAAGGCGACCAACGAGGTCGCCGAGGCGATGCAGGAGAACTTCTCCAAGACCAACCCGATCTTCATGATGGTCGACTCCGGCGCGCGCGGTAACTTCATGCAGATGCGGCAGATCGCCGGTATGCGCGGCCTGGTCTCGAACGCCAAGAACGAGACCATCCCGCGGCCGATCAAGGCGTCCTTCCGCGAGGGCCTGTCGGTGGTCGAGTACTTCATCTCCACCCACGGCGCCCGCAAGGGCCTGGCGGACACCGCGCTGCGGACGGCCGACTCCGGGTACCTCACCCGGCGTCTGGTGGACGTCTCGCAGGACGTGATCATCCGCGAGGAGGACTGCGGCACCGAGCGCGGCATCATGATGCCGATCGCGGCCAAGGGCGCCGACGGCCGGCTGATCAAGGACGAGAACGTCGAGAACTCGGTCTACGCGCGCAACCTCGCCGAGAAGGTCGTCGTCGACGCCGCGTCCGCCAAGGGCAAGGCGACGATCCTCGACGCCGGCGTGGACCTGGGCGACGTCGCGATCGACAAGCTGATCGAGGCCGGAGTGTCGGAGGTCAAGGTCCGCTCGGTCCTGACCTGCGAGTCCAAGGTCGGCACGTGTGCGATGTGCTACGGCCGCTCCCTGGCCACCGGCAAGCTGGTGGACGTCGGCGAGGCCGTGGGCATCATCGCGGCGCAGTCGATCGGCGAGCCCGGCACCCAGCTCACCATGCGCACCTTCCACACCGGCGGTGTGGCCGGCGACGACATCACGCAGGGTCTGCCGCGTGTCATCGAGCTGTTCGAGGCCCGCACGCCCAAGGGCGTGGCGCCGATCGCCGAGGCGGCCGGCCGGGTCCGGATCGAGGACACCGACAAGACCCGCAAGCTCGTCATCACCCCGGACGACGGCTCGGAGGAGGTCGCCTACCCGGTCAGCAAGCGCACCATGCTGCTGGTCGGCGACGACCAGCACGTGGAGGTCGGGCAGGAGCTCACCAAGGGCACCGTCAACCCGCACGACGTGCTGCGCATCCTGGGCCAGCGCCAGGTGCAGATCCACCTGGTGGCCGAGGTGCAGAAGGTGTACCGCAGCCAGGGTGTGCCGATCCACGACAAGCACATCGAGATCATCGTCCGGCAGATGCTCCGCCGGGTGACGATCATCGAGGCCGGCGACGCCGAACTGCTCCCCGGCGAGCTGGTCGAGCGCGGCCGCTTCGAGGTCGAGAACCGCAAGGTGGTCTCCGAGGGCGGACAGCCGGCCTCCGGCCGCCCGCAGCTGATGGGCATCACCAAGGCCTCGCTGGCCACCGACTCCTGGCTGTCGGCGGCCTCCTTCCAGGAGACCACCAGGGTCCTGACGGACGCCGCGATCAACGGCAAGTCCGACTCGCTCCTGGGCCTGAAGGAGAACGTGATCATCGGCAAGCTGATCCCGGCCGGCACCGGCATGCCCCGGTACCGGAACATCAAGGTCGAGCCGACCGAGGAGGCCAAGGCCCAGATGTACACGCTGGTGGGCTACGACGACGACTACTCGTCGTACAGCTTCGGCAGCGGGTCGGGCCAGGCTGTGCCGCTGGAGGAGTACGACTTCGGCGGGTACAGCGGCTGA
PROTEIN sequence
Length: 1266
VLDVNFFDELRIGLATADDIRTWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPTRDWECYCGKYKRVRFKGIICERCGVEVTRAKVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDLAPKDLEKVIYFAAYMITEVDDERRTRDLPSLEAKVSVERQQVENRRDADVEARQKKLEEDLAALEAEGAKADQRRKVREGGEREMKQLRDRAQREIDRLDEVWSRFKSLKVQDLEGDEILYREMRDRYGTYFSGSMGAAALQKRLEDFDLDAEAESLRETIRTGKGQKKTRALKRLKVVEAFRSTNNSPSGMVLDCVPVIPPDLRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPEIIVNNEKRMLQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGKRVDYSARSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERAFEPQLVEGKAIQIHPLVCTAFNADFDGDQMAVPLPLSAEAQAEARVLMLSSNNILSPAHGRPITSPTQDMVLGLFFLTMDRDGMKGEGRAFGSIAEGMMAFDNRELDLQAPIELRISEAVPPRGWEAPEGWETGQPFRLKTTLGRALFNELLPLDYPYENREVAKKQLSAIVNDLAERYPKVTVAATLDNLKSSGFYWATRSGVTVSVEDIVVPPKKGEILEGYESQAAKIQKQYERGLVTKEERNQELISIWTKATNEVAEAMQENFSKTNPIFMMVDSGARGNFMQMRQIAGMRGLVSNAKNETIPRPIKASFREGLSVVEYFISTHGARKGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTERGIMMPIAAKGADGRLIKDENVENSVYARNLAEKVVVDAASAKGKATILDAGVDLGDVAIDKLIEAGVSEVKVRSVLTCESKVGTCAMCYGRSLATGKLVDVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRVIELFEARTPKGVAPIAEAAGRVRIEDTDKTRKLVITPDDGSEEVAYPVSKRTMLLVGDDQHVEVGQELTKGTVNPHDVLRILGQRQVQIHLVAEVQKVYRSQGVPIHDKHIEIIVRQMLRRVTIIEAGDAELLPGELVERGRFEVENRKVVSEGGQPASGRPQLMGITKASLATDSWLSAASFQETTRVLTDAAINGKSDSLLGLKENVIIGKLIPAGTGMPRYRNIKVEPTEEAKAQMYTLVGYDDDYSSYSFGSGSGQAVPLEEYDFGGYSG*