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13_1_20cm_4_scaffold_60_30

Organism: 13_1_20CM_4_Gemmatimonadetes_69_16

partial RP 27 / 55 BSCG 26 / 51 ASCG 10 / 38
Location: comp(28683..28928)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-70 region 2 domain-containing protein n=1 Tax=Micromonospora sp. ATCC 39149 RepID=C4RHK6_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 50.7
  • Coverage: 75.0
  • Bit_score: 71
  • Evalue 6.30e-10
RNA polymerase ECF-type sigma factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated UNIPROT
DB: UniProtKB
  • Identity: 65.8
  • Coverage: 73.0
  • Bit_score: 93
  • Evalue 1.30e-16
RNA polymerase sigma factor, sigma-70 family similarity KEGG
DB: KEGG
  • Identity: 55.7
  • Coverage: 70.0
  • Bit_score: 80
  • Evalue 2.90e-13

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 246
GTGGCAGGCGGCTCCCGCCCCGATGTCGTCGCGGAGCGGCGCGCGCTCGCCGAGCGGCTGCGCAGTGCGCTCGCCGAGCTGCCGGCGCGGCGTCGCATGGCCGTCGTGCTGTTCGACGTGGAAGGCTACTCCCACGCCGAGATCGCCGGGATCCTCGGGATCGCCGAGGGGACCGTCCGGTCGGAGGTGTTCCACGCGCGACGCCGCTTGCGCGTATTGCTGGGAGATTGGAAGGAGGACGGATGA
PROTEIN sequence
Length: 82
VAGGSRPDVVAERRALAERLRSALAELPARRRMAVVLFDVEGYSHAEIAGILGIAEGTVRSEVFHARRRLRVLLGDWKEDG*