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13_1_20cm_4_scaffold_93_26

Organism: 13_1_20CM_4_Gemmatimonadetes_69_16

partial RP 27 / 55 BSCG 26 / 51 ASCG 10 / 38
Location: 24490..26031

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated UNIPROT
DB: UniProtKB
  • Identity: 54.1
  • Coverage: 505.0
  • Bit_score: 477
  • Evalue 2.00e-131
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 49.7
  • Coverage: 481.0
  • Bit_score: 395
  • Evalue 7.00e-107
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 498.0
  • Bit_score: 411
  • Evalue 4.50e-112

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1542
ATGTCGCTCGCCTTCCTCGTCGACCGCTTTGACGAACTGCCCGCGACGCGGGCGCTCGCAGCGGAGCTACCCGCGCGTGGCAGCCGGCGCGCCGTCGCCGGGCTCCCCGGATCGAGTCCCGCAGTGCTGATCGCCGCCGTCGCCCGTCGCTTGCCGCAGCGCCTGTTCGTCGTGGTCGCACCGACCCCGACGGACGCGGAGCGGTGGCTGGCGGACGCCCGCGCCCTCGCGGGCGACGCGGCCGTGCTGTATCCGCAACGGGAAGCGCTCGGGGCAGAGGAGCCGCACGTCGAGATCGCGGGCGAACGGGTCGAAACGCTGGCGGCGCTGCTGTCGGGCAGCGTCCGCATCCTCATCACGACCGCGCGCGCCAGCGCGGAGCGTACGGGGGTGCCGGAGGGCCTGCGAGCGATGGGCCTGCTGCTGGAGACGGGAACGGGGAAGGGGGAAGAGGGAGGGGGGTCGCTCGGCAGCGTCGTGGGGCGGCTTGAGGCTATGGGCTACGCGCGGGTTCCCACCGTGACGGAGGTCGCCCAGTTCAGCGTCCGCGGCGGAATCCTCGACGTGTACGGGTTCGGCATGGCGGCGCCGGCGCGGATCGAGTGGTGGGGCGACGACATCGCTTCGCTGCGCAGGTTCGATCTCGATTCCCAGCGGTCCGCCGAGCAGATCGAGCGGGTCACGATCCTCCCTGTGAGAACCGAGAGCAGCGGGAAGGGCGAAGGGGGCACGGTCCGCTCGTCGCTACTCGATTTGTTGCCGAGCGATGCGCTGCTGGTGCTGGATCAGGAGTCGGCGCTCGACCGGGAAGTGGATCGCGCCTGGGCGGAGGCGGAACATCACCTCGAGGTCGCCCGGCGATTGGGCGAGGAGCCGCCGGCCCGAGAGGACATCTTTGTCGACCCCGCCCGCTGGCGCGCGGGCCTGGCGGCGTTCGCGCGGCTCGCCCTCGGCGCGCCGGACGCGGCGGCCCGCTTCCCGCTGAGCCCGCCCGAGCCGGTGGACCGCGACATCAAGCGGCTGCGCCGGCTGCTGACTGCCGGGCCTCCGACCGTGATTCTGTGCGACAACGAAGGACAGCTCGAGCGGCTGGAGGAGCTGTTGGGGACCGAGGCGGCCACGCTGGCCATCGGAGCGCTGGACGGCGGGTTCGTGCTGCCGTCGCTGCGCGTGCTCACCGATCATGAGATCTTCCGGCGGGCGCGGCGCCTGCGGCGGCCGCGGCGCTACCGCGAGGCGTCCGCAGCGGCCGCCCGGGCGTTGCAGCCGGGCGACTACGTGGTCCATCTCGAGCACGGTATCGGCCGGTACCGCGGGATCCAGACGATCGCGGTGGGCTCCGAAGGGGGGACGCTCGAGGTGGCGGTGAGAAAACGCGGGCCGCCATCCGCCAGATGGCGGCCGAGCTCCTCGATCTCTACGCCCGTCGCCAGGTCGCGGCCGGGTTCGCCTTCCCGCCCGACACCGCCTGGCAGCGCGAGCTCGAGTCCGCCTTCCTGTACGAAGACACACCCGATCAGCGACGCGCGTCCGAGGAAGTGA
PROTEIN sequence
Length: 514
MSLAFLVDRFDELPATRALAAELPARGSRRAVAGLPGSSPAVLIAAVARRLPQRLFVVVAPTPTDAERWLADARALAGDAAVLYPQREALGAEEPHVEIAGERVETLAALLSGSVRILITTARASAERTGVPEGLRAMGLLLETGTGKGEEGGGSLGSVVGRLEAMGYARVPTVTEVAQFSVRGGILDVYGFGMAAPARIEWWGDDIASLRRFDLDSQRSAEQIERVTILPVRTESSGKGEGGTVRSSLLDLLPSDALLVLDQESALDREVDRAWAEAEHHLEVARRLGEEPPAREDIFVDPARWRAGLAAFARLALGAPDAAARFPLSPPEPVDRDIKRLRRLLTAGPPTVILCDNEGQLERLEELLGTEAATLAIGALDGGFVLPSLRVLTDHEIFRRARRLRRPRRYREASAAAARALQPGDYVVHLEHGIGRYRGIQTIAVGSEGGTLEVAVRKRGPPSARWRPSSSISTPVARSRPGSPSRPTPPGSASSSPPSCTKTHPISDARPRK*