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13_1_20cm_4_scaffold_93_27

Organism: 13_1_20CM_4_Gemmatimonadetes_69_16

partial RP 27 / 55 BSCG 26 / 51 ASCG 10 / 38
Location: 26040..27635

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated UNIPROT
DB: UniProtKB
  • Identity: 75.1
  • Coverage: 523.0
  • Bit_score: 760
  • Evalue 2.00e-216
Transcription-repair-coupling factor n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A9L3_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 66.5
  • Coverage: 526.0
  • Bit_score: 674
  • Evalue 8.00e-191
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 526.0
  • Bit_score: 696
  • Evalue 7.30e-198

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1596
ATGGAGCGGGCGCTCCCGATGGATCGGCTGCTGGTCGGCGACGTCGGGTACGGTAAGACCGAGGTGGCGCTGCGTGCCGCCTTCAAGGCGGTGCAGGCCGGAAAGCAGGTCGCGGTGCTCGCCCCCACGACGATTCTCGCGGAGCAGCACGGCCGCACGTTCCGGGAGCGGCTCGCCGACTATCCGGTCACAGTCGAGGTGCTGTCCCGCTTCCGCACCCCCGGCGAGACCAAACGGGTCGTGGGGGGGCTGGAGCGAGGGGACGTGGACTTGGTCATCGGCACGCACCGGTTGCTGTCGCGGGACGTCCGATTCCACGATCTCGGGCTGTTGATCGTGGACGAGGAGCACCGCTTCGGGGTCCGGCACAAGGAGCGCCTGAAGGCGCTGAAGCTCGCGGTGGACGTGGTGACGCTCACCGCGACGCCCATCCCCCGCACGCTGCACCTGTCGCTCGCCGGACTGCGGGACCTGACGCTGCTCGAGACGCCGCCCAAGGACCGCTCGCCGGTTGTGACATTCATCGAGCCGTGGGACGACGGTCTGATCGAAGAGGCGGTGGCGCGCGAGCTCGATCGGGGGGGGCAGGTGTACTTCGTGCATAACCGCATCGAGACGATCGACACGATCGCCCAGCGCGTGCGCGCGCTCGCGCCGTCGCGGGCACGCATTGCGGTGGCGCACGGTCGCCTCAAGGAGGCGGAGCTCGACGACGTCATGGCGCGCTTCGTTCGGGCGGAGGTGGATGTCCTCGTCTCCACGATGATCGTCGAGTCGGGGCTCGACGTCCCGAACGCGAACACGATGATCGTGAACCGCGCCGATCAGCTCGGTCTGGCGCAACTATACCAGTTGCGGGGGCGCGTGGGACGGAGCCACCGCCGAGCCTACTGCTATTTGCTCGTGCCGGACCTGGTGGACGCCGATGCCGAGGAGCGGTTGCGCGTCTTGGAGCACCACACCGACTTGGGCTCGGGATATCGCATCGCGCTGCGCGATCTCGAGCTGCGGGGCGCCGGAAACCTGCTCGGTGGCGAGCAGTCGGGGCACGCGCAAGCCGTTGGGTTCGACATGTATTTGCGCTGGCTCCAGGAAACCGTCGCGGCGCTGAAGAACGGGGAGCGGGGCGCCGGGCGCGGCACCTTCCCGGCGCCGGAAGTCATCTTGGACCAGCCGGCTCATCTGTCCGACTCGTACGTGGGCGACGCGGCGGCGAAGCTCGATCTGTACCGGCGTCTGGCGCGGGCCGAGCAGCCGTGCGAGATTCAGGCGGTGCGCGAGGAGTTGCGCGACCGCTTCGGGCCTCTCCCCGACGAGGCGCAACGCTTGCTCCTCGTGTCCGAGCTCCGCGCGCTTGGCGCCCAGGCGGGACTGGAGATGGTCCTCGTCAAGGGCGACGAGGCGCGGCTCACGTTTCGGCGAGAAGCGCAACCACGCCTCGCCCGCCTGACGGTGGCGCTCGACGCGGTGCAGTTCGAGGCGGAGGTACGGCGGTCGGTGCCGCTGTCCCTGCGACTCCGCCGGCTGGGCGGGGAGGCCATCGGCCCCGGGTTGGTACGTGCCCTCACAGCGGTCCTGCAGGACTCTCACGCCTAA
PROTEIN sequence
Length: 532
MERALPMDRLLVGDVGYGKTEVALRAAFKAVQAGKQVAVLAPTTILAEQHGRTFRERLADYPVTVEVLSRFRTPGETKRVVGGLERGDVDLVIGTHRLLSRDVRFHDLGLLIVDEEHRFGVRHKERLKALKLAVDVVTLTATPIPRTLHLSLAGLRDLTLLETPPKDRSPVVTFIEPWDDGLIEEAVARELDRGGQVYFVHNRIETIDTIAQRVRALAPSRARIAVAHGRLKEAELDDVMARFVRAEVDVLVSTMIVESGLDVPNANTMIVNRADQLGLAQLYQLRGRVGRSHRRAYCYLLVPDLVDADAEERLRVLEHHTDLGSGYRIALRDLELRGAGNLLGGEQSGHAQAVGFDMYLRWLQETVAALKNGERGAGRGTFPAPEVILDQPAHLSDSYVGDAAAKLDLYRRLARAEQPCEIQAVREELRDRFGPLPDEAQRLLLVSELRALGAQAGLEMVLVKGDEARLTFRREAQPRLARLTVALDAVQFEAEVRRSVPLSLRLRRLGGEAIGPGLVRALTAVLQDSHA*