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13_1_20cm_4_scaffold_1190_6

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(6676..8880)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide biosynthesis protein n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD19_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 39.3
  • Coverage: 766.0
  • Bit_score: 467
  • Evalue 3.50e-128
  • rbh
Lipopolysaccharide biosynthesis protein {ECO:0000313|EMBL:EEF62365.1}; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia subdivision 3; Pedosphaera UNIPROT
DB: UniProtKB
  • Identity: 39.3
  • Coverage: 766.0
  • Bit_score: 467
  • Evalue 4.90e-128
lipopolysaccharide biosynthesis protein similarity KEGG
DB: KEGG
  • Identity: 25.2
  • Coverage: 511.0
  • Bit_score: 144
  • Evalue 1.10e-31

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Taxonomy

Pedosphaera parvula → Pedosphaera → Verrucomicrobiales → Verrucomicrobiae → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 2205
ATGCCTGAACATCGAACGGAACCTGAATCTTCAAATCTTAATTTACGCAATATCCTGTTCGCCATCTTCAAATGGAAGCGAATAATCTTAGGCTTTGCGCTCCTCGGCATTGTTGCCGCTGCGGGTATTTATTTTTTCTACCCGGCAGTTTATGAATCGGACGCGAGGCTACTCGTTCGTTATGTGCTCGAAAGAAGCGGCGTTGATCCGGTCGATGCGATCTCTGGTCAAGGCGGCAAAAGCGGCACAGGCATAACCAGCGACGGTGTGATTGCAGCGGAAGTGTCCATTATAACCAGTTGGGACCTATCGGTCCAAGTTGCAGAGGCTTTGGGACCGAATCGGGTGCTGCCTAACGTCAAGGCGCCAACGGTCCTCGGAGCTGCCGCCGCAATTAATTCCGGCCTTTCTACCACTACAGCCAAAGGAAGCAACATCATCGGGGTCTCGTACCAAAATCAGAAACCGGAAGTCGCTACCGCAGTCCTGAATGAATTGGTCAGTCGTTACTTTACCAAACATCTTGAAGTGCACAGGTCGGCTGGCGCGTTCGATTTTGTCAGTCAGCAATCTGACCAAATTCGTGCGCGGCTAAACCAAACGGAAGACGCGCTCAAGGCGATGAAAGCCAAGGCGGGCGTAATGTCACTCAAGGATAGTATGGATAGCCTTGGTGCGCAGTCCTCCCGCTTGGAGGATGCAATAAGAGCGGAGGAGAACGATCTGGCTGAGGAGCAGGCCAAAGTGAAACAGATTGAGCGAGGTGGATTACCAGTAGATTTGAACGAGACAGATAACGCCAAGAACAACCCCCCTGCACCGCCAACCCAGGCATCGACCAAGGACACTGGCGACTATCAAGCGCTGGTGACTAATCTAACGAAGCTACGCGAGACCGAACTGGAGATGTCTGCCAAGTATACTCCTGAAAATGTACTGGTGAAGATGAACCAGGCACATATTAACGACCTGGAGAATCAAAAACGGAACCTGGAAAAGAAATTTCCGGAGCTCGCAACCCTACGAACCGCATCAGGGCAGTTGGATATACGGACTGAGCGCGCGCGCCTTGCCGGAATGAAGTCAAAACTAGACGATCTGCGTCGCCAGAAGATCGAGTTACAGGATCGCATGAAACAGTTGGCCGACATTGGACCACAAATTGCCAGTCTTGAGCGAAACAAGGATCTGGAGGAACAAAATTACAAGTATTATTCCGGGACATTGCAAAAGGCGCGTGTCGACGAAGCGCTTGATCCTTCCAAGATGCCGAACATCAGCGCAATCCAGAGACCTTCTCCGCCGGGAATTGTTACAAAGACTCGCGACAAGATCGCATTTGGATTGGCGGGAGGGGGACTCGCTTTCGGTCTTGGTCTCGCTTTGCTCTTTGAGCTTGTCTTCAACCACAGTTACAAGCGCCGATCGGAGGTCGAGCTGCAGCTGCGTTCGCCCGTCATGCTTTCGATTCCTTATCAAGGCACGAATGGCCGCCGCCTACGCTTGCCTTGGAAAAATGGCCAGCGCGCCGGGAAGGAAGCTCCCGCCAAGACCAAGCCCAATCTTGCTCCATGGGAGGTCGAGCATTTCATTCGTCCCTATTCGGAGGCGATTCGGGATCGTCTCGGCTTATATTTTGAACTACATGGAGTTACCCATAAACCAAAGTTGGTAGGCGTTACTGGTTTTGGCGAAGGTTCGGGAACTTCGACTCTCGCTGCCGGGGTTGCTGCCGCACTCTCGGAAACCGGTGATGGTAAAGTCCTTCTTGTCGATGTAAATGCCGCTAATGGTGAAGTCCATCCATTCTTTGCCGGCCGACCTGCGGCCACCCTTGCTACGGCCATTAAACCGCAAGCAGCGATCACTTCCGCTGCTGACAATCTGTACCTGGCAACAGTTACGCAATCGGGCAACAAATCCACTCATCTTGGACTCAAGAAATTCTTTGCTCTGGTTCCAAATCTCAAGGCTAGCGACTTCGACTATATCATTTTCGATATGCCACCGATTAACCAAACTAGTCCAACTATCGGTTTGGCCGCGTTGATGGATAAGGTTCTAGTGGTGGTAGAAGCGGAGAAGACCCATCGCGATGTGGTAAAGCGCGGTTATCGTGAGCTTGTAGGAGCGCGGGCGGACGTAGCGGTGGTTCTGAATAAGACGCGTAGTTACGGTCCGAACTGGCTCGAAGGCGGAAGTTAG
PROTEIN sequence
Length: 735
MPEHRTEPESSNLNLRNILFAIFKWKRIILGFALLGIVAAAGIYFFYPAVYESDARLLVRYVLERSGVDPVDAISGQGGKSGTGITSDGVIAAEVSIITSWDLSVQVAEALGPNRVLPNVKAPTVLGAAAAINSGLSTTTAKGSNIIGVSYQNQKPEVATAVLNELVSRYFTKHLEVHRSAGAFDFVSQQSDQIRARLNQTEDALKAMKAKAGVMSLKDSMDSLGAQSSRLEDAIRAEENDLAEEQAKVKQIERGGLPVDLNETDNAKNNPPAPPTQASTKDTGDYQALVTNLTKLRETELEMSAKYTPENVLVKMNQAHINDLENQKRNLEKKFPELATLRTASGQLDIRTERARLAGMKSKLDDLRRQKIELQDRMKQLADIGPQIASLERNKDLEEQNYKYYSGTLQKARVDEALDPSKMPNISAIQRPSPPGIVTKTRDKIAFGLAGGGLAFGLGLALLFELVFNHSYKRRSEVELQLRSPVMLSIPYQGTNGRRLRLPWKNGQRAGKEAPAKTKPNLAPWEVEHFIRPYSEAIRDRLGLYFELHGVTHKPKLVGVTGFGEGSGTSTLAAGVAAALSETGDGKVLLVDVNAANGEVHPFFAGRPAATLATAIKPQAAITSAADNLYLATVTQSGNKSTHLGLKKFFALVPNLKASDFDYIIFDMPPINQTSPTIGLAALMDKVLVVVEAEKTHRDVVKRGYRELVGARADVAVVLNKTRSYGPNWLEGGS*