ggKbase home page

13_1_20cm_4_scaffold_7836_4

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: comp(1618..2160)

Top 3 Functional Annotations

Value Algorithm Source
peptidase, U7 family protein n=1 Tax=Verrucomicrobium spinosum RepID=UPI0001745118 similarity UNIREF
DB: UNIREF100
  • Identity: 45.5
  • Coverage: 165.0
  • Bit_score: 139
  • Evalue 4.10e-30
Signal peptide peptidase SppA, 36K type {ECO:0000313|EMBL:EDY18656.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flav UNIPROT
DB: UniProtKB
  • Identity: 47.7
  • Coverage: 172.0
  • Bit_score: 138
  • Evalue 7.60e-30
sppA; Periplasmic serine protease, ClpP class similarity KEGG
DB: KEGG
  • Identity: 42.2
  • Coverage: 173.0
  • Bit_score: 126
  • Evalue 7.80e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 543
ATGGCAAATCGCAAACTCGGCTGTCTCACGCTCTTCCTGTTCCTGGCGCTTTGCGCAAGCGTGATCATTAACGCTTTCCTGGCTATTGCTCTCCTCGGCCGCGTCAGTACGGGCGTCGCCCGCGAAGAGCCGCTGGCAAAATTCCGCGAAATAGTGGTGCAACGTGGCGGACGCGGCGTCTCCGATCGTATTGTGATCATTGTCATGCGCGGTTTGATTAGTAGCTCCATTCCCGGAGCCGCCAGCGACAACATGGTGGATGATCTGCGCATGGCTTTGCAGCAGGCGCGCGATGACGATCGGGTCAAGGGTGTTGTTTTGGAAGTCGATTCGCCCGGCGGTGAAGTAACCGCCTCGGATATGATTTACAACGCCGTGGTCAAAACGCGGGCGCGGAAACCTGTGGTAGTATACATGGATTCGCTGGCCGCGTCTGGTGGCTACTATGTCTCCTGCGGCGGCAAATATCTCATGGGGCGCCCGCCCGATGACGCCGGAGGAGCGCGAATTTGTGCAGAATTTTGTCATGAAAACGTACGATAA
PROTEIN sequence
Length: 181
MANRKLGCLTLFLFLALCASVIINAFLAIALLGRVSTGVAREEPLAKFREIVVQRGGRGVSDRIVIIVMRGLISSSIPGAASDNMVDDLRMALQQARDDDRVKGVVLEVDSPGGEVTASDMIYNAVVKTRARKPVVVYMDSLAASGGYYVSCGGKYLMGRPPDDAGGARICAEFCHENVR*