ggKbase home page

13_1_20cm_4_scaffold_58_3

Organism: 13_1_20CM_4_Gemmatimonadetes_66_11

near complete RP 42 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: 4592..5734

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WIA0_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 38.8
  • Coverage: 381.0
  • Bit_score: 230
  • Evalue 3.80e-57
RND family efflux transporter MFP subunit Tax=GWC2_Gemmatimonadetes_71_10_curated UNIPROT
DB: UniProtKB
  • Identity: 56.1
  • Coverage: 380.0
  • Bit_score: 387
  • Evalue 2.00e-104
probable RND efflux membrane fusion protein similarity KEGG
DB: KEGG
  • Identity: 33.0
  • Coverage: 339.0
  • Bit_score: 222
  • Evalue 2.20e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWC2_Gemmatimonadetes_71_10_curated → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1143
ATGTCGTACCGCGCCCTTGCTGTTCTGCTCCTGCTCGCGGCTCCGGCCGCGTGCAAAAAGGCCAACTCCGGGGCAGGTGGCGGACCCGGTGGCGGTGGTTTCGCCATGCCCGTCGAGGTCGCTGCCGCCATCCGCGACACCGTCGTTGACGCGATCGCGGCAACCGGCCAGATCGAAGCGATCCAGTCGATCGAGTTGCGGCCCGAAGTCTCCGGACGCATCACCGACATCCTCGTGCGGGAAGGCCAGGAGGTCGGCGCAGGCACGCCGCTGTTCAAGGTGGATGACGCGGAGCTGAAGGCGCAGGTCGCCCAGGCCGATGCCGAGCGGCAGCTTGCCCGCCAGGCGCTGGAGCGCACCAAGCAGCTGATCGCCCAGAACGCGTCCTCGACGTCAGATCTCGAGCAGGCCGAGGCCAAATCGCGTGGCGCCGACGCCAACCACGATGTGCTGAAGACCCGACTCGACCGCACCGTGGTCCGCGCGCCGTTCGCGGGCGTCATCGGCCGCCGCCTCGTGAGCATCGGGACGTACGTCTCGTCGCAGACCCCGCTGATCACGCTGCAGTCGGTGAATCCGCAACACGCCTCGTTCGACGTGCCGGAGCGCTACGCCGACCGGCTGCGCCGCGGTCAGCTTGTGAGTTTCCAGGTCGCCGCGCTCCCGGGGAAGAACTTCTCAGGCGAGGTCGTATTTGTAGACCCCGTGGTCTCGCTGCCGGGCCGCACGATTCTCATCAAGGCGCGCGTCCCGAACAACGAGCATCAGCTCCAGGCTGGCATGTTCATCGAGGCGCGGCTCGCGACCGCCATCCGGCCCAATGCCGTCGTCGTGCCCGAGGACGCGCTGCTCCCGATGCAGGGCGCGACGTTCGTGTGGGTGGTGAAGGACGGCAAAGCCAATCAGCGCCAGGTGACGGTCGGCGTTCGGACCGCCGGCTGGGCTGAGGTCCAGAGTGGTGTGGAAGCCGGCGACCAGGTGGTCGTCGGCGGGCTGGAGCGGCTGTTCCCGAACGCGCCCGTCATGGCGCGCGTGGTCGAGCGGCACCGCGGTGCGCCGGCGGGACAGGAGTCGACCGCCGCGACGACACGGCCGGCCGGCGGGAGCGCCGCGCCAGCCGGGAAGGACTCAACGAAGCACTAG
PROTEIN sequence
Length: 381
MSYRALAVLLLLAAPAACKKANSGAGGGPGGGGFAMPVEVAAAIRDTVVDAIAATGQIEAIQSIELRPEVSGRITDILVREGQEVGAGTPLFKVDDAELKAQVAQADAERQLARQALERTKQLIAQNASSTSDLEQAEAKSRGADANHDVLKTRLDRTVVRAPFAGVIGRRLVSIGTYVSSQTPLITLQSVNPQHASFDVPERYADRLRRGQLVSFQVAALPGKNFSGEVVFVDPVVSLPGRTILIKARVPNNEHQLQAGMFIEARLATAIRPNAVVVPEDALLPMQGATFVWVVKDGKANQRQVTVGVRTAGWAEVQSGVEAGDQVVVGGLERLFPNAPVMARVVERHRGAPAGQESTAATTRPAGGSAAPAGKDSTKH*