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13_1_20cm_4_scaffold_709_14

Organism: 13_1_20CM_4_Gemmatimonadetes_66_11

near complete RP 42 / 55 BSCG 43 / 51 MC: 1 ASCG 10 / 38
Location: comp(17897..18751)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=RHO_GEMAT similarity UNIREF
DB: UNIREF100
  • Identity: 57.2
  • Coverage: 264.0
  • Bit_score: 275
  • Evalue 5.80e-71
transcription termination factor; K03628 transcription termination factor Rho Tax=RIFCSPLOWO2_12_FULL_Gemmatimonadetes_68_9_curated UNIPROT
DB: UniProtKB
  • Identity: 78.3
  • Coverage: 249.0
  • Bit_score: 396
  • Evalue 4.10e-107
transcription termination factor similarity KEGG
DB: KEGG
  • Identity: 57.2
  • Coverage: 264.0
  • Bit_score: 275
  • Evalue 1.60e-71

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Taxonomy

RLO_Gemmatimonadetes_68_9 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 855
ATGCTCCCCGTCACCGGATGGTTTGATCCCTCGCCCAAAGGCGGCGCGCTCCGTCTTGCGGCGAACAGTTATCTGCCCGCAAAGGGTGACCCGGCGGTGCGGGTGCCGGGCCTCCGTCGCGGCGACCTGATCGTCCTCGAAAACGGTCGCGTGACGACGGTCAACGGTCTCCCGGCGTCGCAGCTCGACGGGCGTCCAGAGTTCGCATCGCTCGGCGCCGTCCATCCCAGCCGGCCGCTGACCCTCGAGACGCCACGTGCCTCCAGCCCACGGACCGCGGATATCCAGCGCGTCGTCGATCTCATCTGCCCGTTTGGCTTCGGGCAGCGTGCGCTCATCGTCTCGCCTCCCAAAGCGGGGAAGACGATGATGCTCCAGGCGATTGCGGAAGCGGTGGCCGAGAATCATCCCCAAGCGCTGTTGCTGGTTCTACTCGTCGACGAGCGGCCCGAGGAGGTCACGGAGATGGTGGATTGGGGCAGGGGCGAGGTCGTCGCCTCGAGCTTCGACCTGCCGCACGAGCGCCACGTGGCCGCGGCGGAAATGGTGTTCGATCACGCCCGCCGCCAAGTGGAGCTCGGCCGGGATGCCGTCATCGTGCTCGACTCACTCACGCGGCTCGCGCGCTCCCACAACACCACGGGGCGGGGGAGTGGCCGCACGATGTCGGGCGGGCTCGATGCCAATGCGTTGGCCAAGCCGAAGGCCCTGTTCGGCGCGGCGCGCGCCGTACCTCAGGGTGGATCGTCGAGGAGCTCCTCGGCGATGCCAAGACAATCGAGGCCAAGCAAAAACTCCGGCGGGGTTTGGTGGATCTCCCGCCGGAGCAAGCCATGCACAGTCTCTTGCAACTAA
PROTEIN sequence
Length: 285
MLPVTGWFDPSPKGGALRLAANSYLPAKGDPAVRVPGLRRGDLIVLENGRVTTVNGLPASQLDGRPEFASLGAVHPSRPLTLETPRASSPRTADIQRVVDLICPFGFGQRALIVSPPKAGKTMMLQAIAEAVAENHPQALLLVLLVDERPEEVTEMVDWGRGEVVASSFDLPHERHVAAAEMVFDHARRQVELGRDAVIVLDSLTRLARSHNTTGRGSGRTMSGGLDANALAKPKALFGAARAVPQGGSSRSSSAMPRQSRPSKNSGGVWWISRRSKPCTVSCN*