ggKbase home page

You do not have permission to do that.

Please email help@ggkbase.berkeley.edu for help.

13_1_20cm_4_scaffold_1126_2

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: comp(489..1775)

Top 3 Functional Annotations

Value Algorithm Source
aminotransferase class-III; K01845 glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 85.0
  • Coverage: 412.0
  • Bit_score: 717
  • Evalue 1.20e-203
Glutamate-1-semialdehyde 2,1-aminomutase id=3772777 bin=GWC2_Methylomirabilis_70_16 species=alpha proteobacterium BAL199 genus=unknown taxon_order=unknown taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 66.0
  • Coverage: 423.0
  • Bit_score: 570
  • Evalue 1.30e-159
aminotransferase class-III similarity KEGG
DB: KEGG
  • Identity: 53.6
  • Coverage: 425.0
  • Bit_score: 448
  • Evalue 2.10e-123

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1287
ATGACCGATCAAGACGACCTCTTGCGACGCGCCGCACACGCGCTCCCGGGTGGCCTGCTCGGCAATCACCGGAGCGGCGCCGGCCTCGAGTTCGTCGTGAAGGAAGGCCGCGGCGCCTACCTCTGGGACATGAACGGCCGACGCTACCTCGACTACCTCCTCGGCTCCGGCCCGATGCTCCTCGGCCACGCCCATCCCGCCGTCGTCGAGGCGGTCGAGCGCCAGGTACGGCGCGGCACGTCGTACATGCTGCTCAACGAGCCCGCGATCGAGCTGGCGGAGGAGGTGGTGCGGGCGGTCCCGTGCGCCGAGCAGGTGCGGTACACGTCGAGCGGGACGGAGGCGACGTTCTTCGCGCTCCGCGTGGCGCGCGCCTTCCGCGGGCGCGACAAGATCATGAAGTTCGAGGGCGGCTTCCACGGCACCCACGACTACGGGATGATGAGCGTCTCGCCGCGGTCGCCGAAGGCCTTCCCGGCGCCGACGCCCGACTCGGCCGGCATCCCGCCCGCCCTCGAGGGCGACGTGTTGGTCGCGCCGTACAACGACCTGGCGACGGCGGAGGCGCTGATCGCCACACACCACGACGCGCTCGCCGCGGTCATCATCGAGCCCTACCAGCGCACGATCGTGCCCGCGCCCGGCTTCCTGCCGGGCCTGCGCGCCGCGACGCGACGCTATGACGTTCCGCTGATCTTCGACGAGATCGTCACCGGCTTCCGCTTTGCGTACGGCGGCGCGCAGGAGTACTACGGCGTGGTTCCCGACCTCGCGGCGTACGGCAAAGTCATGGCCGGCGGCTTCCCGCTCGCGTGCGTCGCGGGGCCACGAGGGGTCATGCGCCACTTCGACGCGGCGCTCGAGGGGACGCCGGAGTACGTCTGGCAGGCCGGGACGTTCAACGGCAACGCGATCGCGTGCGCCGCGGGACTCGCCACGCTGGCGGAGCTCCGGACGCCGGGCACGTACGCGCGACTCCACCGGACGGGCGCGCGCCTGCGCGACGGGCTCGCCGCCGCGGTGCTCAAGCACGGCGTCGCCGCACGCGTGAGCGGAGAACCACCCGTCTTCGACATCGTCTTCACCGATCGGCCCGTCGTCGATTACCGTGCGACGCTGACGGCAGACCGCGAGCGGATCAAGCGGTTCAACGCGGAGCTCCTGCGGCGCGGCGTGGTGAAGGCGGTCAACAAGATCTACGTCTCGCTCGCCCACACCGACACGGACGTGGACGAGACGATCGACGTGTTCGACCGGGCCCTGGCGGTGATCGCCGAGAGCACCTGA
PROTEIN sequence
Length: 429
MTDQDDLLRRAAHALPGGLLGNHRSGAGLEFVVKEGRGAYLWDMNGRRYLDYLLGSGPMLLGHAHPAVVEAVERQVRRGTSYMLLNEPAIELAEEVVRAVPCAEQVRYTSSGTEATFFALRVARAFRGRDKIMKFEGGFHGTHDYGMMSVSPRSPKAFPAPTPDSAGIPPALEGDVLVAPYNDLATAEALIATHHDALAAVIIEPYQRTIVPAPGFLPGLRAATRRYDVPLIFDEIVTGFRFAYGGAQEYYGVVPDLAAYGKVMAGGFPLACVAGPRGVMRHFDAALEGTPEYVWQAGTFNGNAIACAAGLATLAELRTPGTYARLHRTGARLRDGLAAAVLKHGVAARVSGEPPVFDIVFTDRPVVDYRATLTADRERIKRFNAELLRRGVVKAVNKIYVSLAHTDTDVDETIDVFDRALAVIAEST*