ggKbase home page

13_1_20cm_4_scaffold_1251_16

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: comp(17049..17681)

Top 3 Functional Annotations

Value Algorithm Source
two component LuxR family transcriptional regulator Tax=CSP1_5_NC10 UNIPROT
DB: UniProtKB
  • Identity: 65.6
  • Coverage: 209.0
  • Bit_score: 274
  • Evalue 1.30e-70
two component LuxR family transcriptional regulator id=14430684 bin=bin3_NC10 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin3_NC10 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 209.0
  • Bit_score: 274
  • Evalue 9.60e-71
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain similarity KEGG
DB: KEGG
  • Identity: 49.3
  • Coverage: 211.0
  • Bit_score: 196
  • Evalue 9.40e-48

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CSP1_5_NC10 → NC10 → Bacteria

Sequences

DNA sequence
Length: 633
ATGCCGAGCCGGATTCTCCTCGCCGATGACCACCTGATCGTGCGCCAGGGCCTGAAAGCCCTGCTCGAGCACGAAGGGTTCGCGGTCGTCGCTGAGGTCGGCGACGGCCAGGAGGCGGTCCGCGTGTCGCGCGAGCGCCGCCCTGACGTGGTCGTGCTGGATTTTGCGATGCCACTCCTGAACGGACTCGGTGCCGCCGGGGAGATCCTCCGCGCTTGTTCCCGCACCAAGGCGATCCTCCTGACGATGCACACGGAGGACCACTACGTCCTGGAGGCGCTCAGGGCGGGTGTCAGGGGCTACGTCGTGAAGACGCAGGCCTCGGCGGATCTCGTGCGGGCGATCAACGAGGTGCTGCGGGGCACGGTGTACCTGAGCCCCGGAATCTCCCAGGCCGTCGTCGAGGCGTACCTGTCCAAGTCGGAGGTGCCGCCCGACCCGTTGACGGCGCGGGAGCGCGAGGTCCTCCAGCTGGTCGCGGAGGGCAAGTCCACGAAAGAGATCGCCAAGCTCCAGGGGATCAGCTTCAAGACCGCCGAGTCTCACCGGACCCGGATCATGAGGAAAACCAACATCCACGGCACCGCTGGCCTCGTCCGGTATGCGGTCCGCCGTGGCCTGATCCAGCTCTAG
PROTEIN sequence
Length: 211
MPSRILLADDHLIVRQGLKALLEHEGFAVVAEVGDGQEAVRVSRERRPDVVVLDFAMPLLNGLGAAGEILRACSRTKAILLTMHTEDHYVLEALRAGVRGYVVKTQASADLVRAINEVLRGTVYLSPGISQAVVEAYLSKSEVPPDPLTAREREVLQLVAEGKSTKEIAKLQGISFKTAESHRTRIMRKTNIHGTAGLVRYAVRRGLIQL*