ggKbase home page

13_1_20cm_4_scaffold_1908_8

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: 4697..6520

Top 3 Functional Annotations

Value Algorithm Source
GntR family transcriptional regulator Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 78.2
  • Coverage: 527.0
  • Bit_score: 786
  • Evalue 3.00e-224
Transcriptional regulator, GntR family with aminotransferase domain protein id=3741119 bin=GWF2_Methylomirabilis_70_14 species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 517.0
  • Bit_score: 648
  • Evalue 5.40e-183
GntR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 42.5
  • Coverage: 527.0
  • Bit_score: 383
  • Evalue 1.60e-103

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1824
ATGGTGGACCACGTCGCGCGCGCCGCGCCGCGCATCGCGTACATGAGCGTCTCGCTGATCTCGTCGTCCGTGGCGCCGGCTTGCTTCGCAGCCGCGAAGCGTCCCGGCACTCAGGACGTGCAGCCGGGGGTTGAACGCCAAGGCGATTATAGCGGACGCCGCGATTGGCCGGGTGGCGGCCAGTCCAATTGGCTCTTGACTGGGTTCGATTCGAGGTCAAAATGGCTGGGCAGGGTGACCACTGTGAATATCGCGCTCGACCGGGACAAGCCGATCCCACTGGCGCGCCAGATCCAGGCGCACCTCGAGCGACTCATCCGCGAGCGGCTGCTGGCCCCGGGGATGAAGCTGCCCGCGACCCGCGAGCTCGCGCACTCGCTCGGCGTGAACCGCGGCACGGTCGCCGAGGCGTACGAGGAACTCGTCGCCGCCGGCTGGGCGCGCGCCCACGTCGGCCAGGGCACGTTCGTCACCGAGAGTCCCGGCGCCCCGGGCGCCTCGGAGCCACGCCGCACCTCTGGCGGGTCCCCCTCGGTCGACGGGGATCTCGCGGCCCCCGCCCCACTGGCGCCGGCGCCCCTCGACTGGCCCGCGCTCCTCTCCCGGAGCGCGCAGATCATCGCCGCCGAGGACGAGCGGGCGCGCACGCTCGTGAGCGCGGCGACGTCGAACCCGGCGGTGATCTCGTTCGCCGGCGGCATGCCCGACAGCGGGCTCTTCCCCACCGACGCGTTCCGGCGGGTGCTCAACCAGGTCATTCGCGACGAGGGCGCGTCGCTGCTCCAGTACTACCCGGCGGGCGGCTACCCGCCGCTCCGGCGCTACCTGTCGACCTATCTCTTGCGGTTCGGCCTCGAGGCGCGGCCGGAGGAGATCCTGATCGTCAACGGGTCGCAGCAAGGGTTCGACCTGATCGCGCGCACCCTCATCGACCAGGGCGACACCGTCGCGATCGAGCAGCCGACGTACCCCCGCGCCCTCCAGGTGTTCCGGTCCTTCGGCGCCCAGCTCGCGCCCGTGCCGTGGGACGCGGTGGGGCCGCGCGTTGAAGTCTTTGAGCGCCTGCTCGAGCGCCACGCGCCGAAGCTCTTCTATTGTCAGCCGAGCGCCCACAACCCCACCGGCCTCACGCTCCTCCCCGAGACCGGGCGGCGGCTGCTCGAGGTGGCCGTGCGCCACCACGTGCCGATCGTCGAGGACGGCTTCGACGGGAGCCTCTACTACGGCGCCCGGCCGGCCGTGCCCCTCAAGGCGGCCGACGTGCACGGGGTCGTGATCTACATCGGCACCTTCTCGAAGATCCTCTTTCCGGGGCTGCGCCTCGGGTGGGTCGTCGGCGCGCCCCCGATCCTCGAGCGGCTCCAGGCGGCCAAGCAGCTCGCCGACCTCCACACGAGCGCGCTCATCCAGGCGGCGGTCCACCGGTTCTGCGAGCGGCGGCTCCTCGACCGCCACGCGGCGCGCGTGGCGCGCGAGTACGCGCGGCGGCGCGCGCTCCTGCTTACGGCCCTCAAGCGCCGGATGCCGGCCGAGGTGACCTGGACCGAGCCCCAGGGGGGCTTCTCGCTCCTCCTCACGCTGCCACCCGGGCTCGACGCCACGGAGCTCCTGCCGGCGGCGATCGAGCGCGGCGTCGCGTTCACGCCGGGCGCGCCGTTCTTCATGGACGGCGCCGGCGCCGGCACGCTGCGGCTGTCGTTTTCGTCCGTGGCGGCGGGACGGATCGACGAGGGGGTCCGGCGACTCGGCGAGACGATCAAGGCGGCGCGGCCCCGGCCCCGGGGTCGGGGCCGGCTCGAACCCGCGACCGTTCCAGTGGTGTAG
PROTEIN sequence
Length: 608
MVDHVARAAPRIAYMSVSLISSSVAPACFAAAKRPGTQDVQPGVERQGDYSGRRDWPGGGQSNWLLTGFDSRSKWLGRVTTVNIALDRDKPIPLARQIQAHLERLIRERLLAPGMKLPATRELAHSLGVNRGTVAEAYEELVAAGWARAHVGQGTFVTESPGAPGASEPRRTSGGSPSVDGDLAAPAPLAPAPLDWPALLSRSAQIIAAEDERARTLVSAATSNPAVISFAGGMPDSGLFPTDAFRRVLNQVIRDEGASLLQYYPAGGYPPLRRYLSTYLLRFGLEARPEEILIVNGSQQGFDLIARTLIDQGDTVAIEQPTYPRALQVFRSFGAQLAPVPWDAVGPRVEVFERLLERHAPKLFYCQPSAHNPTGLTLLPETGRRLLEVAVRHHVPIVEDGFDGSLYYGARPAVPLKAADVHGVVIYIGTFSKILFPGLRLGWVVGAPPILERLQAAKQLADLHTSALIQAAVHRFCERRLLDRHAARVAREYARRRALLLTALKRRMPAEVTWTEPQGGFSLLLTLPPGLDATELLPAAIERGVAFTPGAPFFMDGAGAGTLRLSFSSVAAGRIDEGVRRLGETIKAARPRPRGRGRLEPATVPVV*