ggKbase home page

13_1_20cm_4_scaffold_2063_1

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: 2..160

Top 3 Functional Annotations

Value Algorithm Source
rpoN; RNA polymerase factor sigma-54 (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 46.0
  • Bit_score: 64
  • Evalue 1.10e-08
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 50.0
  • Bit_score: 87
  • Evalue 5.80e-15
sigma-54 factor RpoN; K03092 RNA polymerase sigma-54 factor id=14625757 bin=bin7_NC10_sister species=Anaeromyxobacter dehalogenans genus=Anaeromyxobacter taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 51.0
  • Bit_score: 86
  • Evalue 9.30e-15

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 159
GGGAACGAGGACGCCACCAAGCCCCTGTCCGACCAGGAGGTCGCCGGGATCCTCAAGGGCCGCGGCCTCACGATCGCCCGGCGCACCGTGGCGAAGTACCGGGAGGAGCTCGGCATCCTGCCCTCGCACCAGCGCCGGCTCCAGCCACGCAAGCGGTGA
PROTEIN sequence
Length: 53
GNEDATKPLSDQEVAGILKGRGLTIARRTVAKYREELGILPSHQRRLQPRKR*