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13_1_20cm_4_scaffold_224_4

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: comp(2584..2949)

Top 3 Functional Annotations

Value Algorithm Source
Electron transport protein SCO1/SenC Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated UNIPROT
DB: UniProtKB
  • Identity: 72.1
  • Coverage: 122.0
  • Bit_score: 180
  • Evalue 1.20e-42
electron transporter SenC KEGG
DB: KEGG
  • Identity: 51.4
  • Coverage: 72.0
  • Bit_score: 64
  • Evalue 3.20e-08
Electron transport protein SCO1/SenC id=4166553 bin=GWA2_Methylomirabilis_73_35 species=Opitutaceae bacterium TAV5 genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 71.5
  • Coverage: 123.0
  • Bit_score: 178
  • Evalue 4.10e-42

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Notes

CusF with Met replacing Trp Cristina Butterfield (5/26/16)

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 366
ATGCGCGCGTGGAAGGCCGTCGTCCTGATCAACCTGGCGCTCGTCGTCGGCGTCGGCTGCGGGTATGTGTCCTGGGGACTCCGCGCAAGACGCCTCGAGCGCGAGCTCGCCGCCACGCGTGCGGCCGCGGCCGGCGTCGAGCGGGAGTGGAGCGTCGAGGGCGTGGTCCGCGCGGTCCTGCCCGAGATCAACGTGCTGGTCCTCACCCACGGCGAGATCCCGGGCTACATGCCCGCGATGACCATGGGCTTCCGCGCCGCCTCCCCAAAAATTACCGACTCGATTCGAGTGGGAGACGCGGTACGATTTACGTTACGGGGTGTGCCGCCGAACGTGATGATCACCGCGATCGAGAACGCCAAGTGA
PROTEIN sequence
Length: 122
MRAWKAVVLINLALVVGVGCGYVSWGLRARRLERELAATRAAAAGVEREWSVEGVVRAVLPEINVLVLTHGEIPGYMPAMTMGFRAASPKITDSIRVGDAVRFTLRGVPPNVMITAIENAK*