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13_1_20cm_4_scaffold_224_5

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: comp(2949..5072)

Top 3 Functional Annotations

Value Algorithm Source
copper resistance D domain-containing protein; K07245 putative copper resistance protein D Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 68.4
  • Coverage: 659.0
  • Bit_score: 862
  • Evalue 3.90e-247
Cytochrome c, class I id=4166552 bin=GWA2_Methylomirabilis_73_35 species=Nitrosospira multiformis genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 65.6
  • Coverage: 660.0
  • Bit_score: 835
  • Evalue 4.70e-239
  • rbh
copper resistance D domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 33.7
  • Coverage: 686.0
  • Bit_score: 325
  • Evalue 4.50e-86

Lists

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Notes

CopD Cristina Butterfield (5/26/16)

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 2124
GTGCGCCCGCGCACCGGCCACCCCGAAGAGGAGGGCGGCCGGGAGGAGGAGCAGCGTCGCGCGGGCTCGAAGCATCAGTCGATCGGCACTCTACCCGAACAACGCCCGTCGCTCAACGCCGGTTCCGCCTTCTTGTACACTAGCCCGGTGCTGGCACTCGGGCTCGCCGTCCGCTCGACGCATCTCGCCTGCTCGGTCCTCCTCGTCGGCGCCGCGACGGTCATCGTGCTCGCCGGCCGCTCGGATCGCGCGACGGCGATTCAGTGGGAAGGACGCCTGCTCGCCTGGTCGCGCGTCCTCGCGCTCGCGGCCCTCGCGTCCGGGCTCGCCCAGGTCGCCCTCCAGGCGGCGCGCCTCGAAGGGCGCGCGGCGGCCGCGCTCGAGCCGTCCGCGATCGCGCGGGTGCTCCTCGAGACCCAGGCGGGTCACGTCTGGCTCGTCCGCTACGGCGTCCTCGTGCTGCTCGCGACGTTTCTCGCGCTGCGCCTCGACGTGGAGCGACGCGTGGACTGGCGAGCGGCGCGGGGCGAGCCCGTGCTGCTCGGCGCGGCCGCCCTCGTTCCGATCGCGGCCTCGGGCCACGCGGCCGCCGTGGAGCCGTCCGCGGCGCTCGCGATCGCCGCGGACGGCATTCACCTGCTCGCCACGGGTGTGTGGGCCGGCGGGCTCCTCCCGCTTGCCCTCCTGCTCCGCGCCGCCGGGCGCGACGGGGGCGCCGACGCGCGGCCCTACGCCGTCCTCGCGGCGCGCCGCTTCTCCCGCTGCGCGCTCGCCGCGGTGATCACGCTCGCCCTCTCGGGCACGGTGATGGCGGCGACGAATGTCGCCACCGTCGCCGGGCTCGTCGGGACTTCATATGGTCGCCTCCTGCTGTTGAAGATCACGCTCCTGCTCCCGATCCTGGCGCTCGCGTCGCTGAATCGCTCGGTCCATCTTCCGCGCCTCTCCGGCGACGGCCCCACCGTCGGGCGTCCGGCGATGCGGCGGCTCGCGCGCTTCGTAATCGTAGAGGCCGCCCTCGCCCTCGCGGTCCTTTCCGTCGTCGGCGCGCTGACCCTCACGCCGCCCGCGCGCCACGAGCCGCCCGCGTGGCCATTCGCCTTCCGCCTCTCGCTCGTGGGGCTCGAGGGCGGGTCGAGCGCGGCCCTGCGGGCGCTCACGGGCAGCCAGGTCGCGGTGCTCGGCCTGATCGGGATGATCACCGCGCTCCTCCTCCGTGCGTGGCGGCTGCCGCTCCTCGTCGGGGGAATCGTCCTTCTCGCCGCGGGCGCCGGCCTCGCGCTGCCGCCGCTCGCCATCGACGCCTACCCGACGACCTACCTGCGGCCGGCCGTCCCGTACCAGGCGGCGTCGATCGCGACGGGCGCGACCCTCTACGAGACGAACTGCACCGTCTGCCACGGGACGACGGGAGCCGGCGACGGCCCGGGCGGCGCCCGTCTCCCCCGGCGTCCCGCCGACCTCCGCGCGCCCCACACGGCGCAGCACACGGCGGGCGACCTCTTCTGGTGGATCACCCACGGCATCCCGCGGGGCGAGATGCCCGCGTTCGGCGACCGCCTGAGCGAGGAGGAGCGGTGGGACCTCGTGAACTTCCTCCGCGCGCTGTCCTCCGCGTACGCCGCGCGCACCCTGGGAGGGAGCGTCGAGCCCGAGCGCTCGTGGCTCATCGCGCCCGACTTCACGTTCGCCGTCGGCCCGACGCCGGCGCGCGCGCTCAAGGAGTATCGCGGACGGCGGATCGTGCTGCTCGTCCTCTACTCGCTGCCCGGCTCGCGGCCGCGGCTCGCCCAGCTCGCGCAGCGCTACGACATCCTCGTCACGCTGGGGGCCGAGGTCGTCGCGGTACCGACCGACGCGGCGCCCGACGCCATCACGCGTCTCGGCGCCGAGCCGCGCGTCTTCTTCCCCGTCGTGACCGGGGGCGCCGACGAGATCGTCGCCGCGTACCGCCTCTTCGCCCGCCCGCCCCACGCCGAGCTCTTGATCGATCGCCAGGGCTACATCCGCGCGATCAGCCACGGGAGCGGCGCGGCCACCGAGATGAACGCGCTGCTCGCCGAGATCCAGCAGCTCAACGAGGAGAAGGTGCAGGCGCCGGTGCCGGAAGAGCACGTGCACTGA
PROTEIN sequence
Length: 708
VRPRTGHPEEEGGREEEQRRAGSKHQSIGTLPEQRPSLNAGSAFLYTSPVLALGLAVRSTHLACSVLLVGAATVIVLAGRSDRATAIQWEGRLLAWSRVLALAALASGLAQVALQAARLEGRAAAALEPSAIARVLLETQAGHVWLVRYGVLVLLATFLALRLDVERRVDWRAARGEPVLLGAAALVPIAASGHAAAVEPSAALAIAADGIHLLATGVWAGGLLPLALLLRAAGRDGGADARPYAVLAARRFSRCALAAVITLALSGTVMAATNVATVAGLVGTSYGRLLLLKITLLLPILALASLNRSVHLPRLSGDGPTVGRPAMRRLARFVIVEAALALAVLSVVGALTLTPPARHEPPAWPFAFRLSLVGLEGGSSAALRALTGSQVAVLGLIGMITALLLRAWRLPLLVGGIVLLAAGAGLALPPLAIDAYPTTYLRPAVPYQAASIATGATLYETNCTVCHGTTGAGDGPGGARLPRRPADLRAPHTAQHTAGDLFWWITHGIPRGEMPAFGDRLSEEERWDLVNFLRALSSAYAARTLGGSVEPERSWLIAPDFTFAVGPTPARALKEYRGRRIVLLVLYSLPGSRPRLAQLAQRYDILVTLGAEVVAVPTDAAPDAITRLGAEPRVFFPVVTGGADEIVAAYRLFARPPHAELLIDRQGYIRAISHGSGAATEMNALLAEIQQLNEEKVQAPVPEEHVH*