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13_1_20cm_4_scaffold_2501_2

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: 622..1020

Top 3 Functional Annotations

Value Algorithm Source
Fis family two component sigma-54 specific transcriptional regulator; K07713 two-component system, NtrC family, response regulator HydG Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 129.0
  • Bit_score: 126
  • Evalue 2.80e-26
Two component transcriptional regulator id=4905366 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=Pseudogulbenkiania taxon_order=Neisseriales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 51.1
  • Coverage: 131.0
  • Bit_score: 119
  • Evalue 1.90e-24
multi-sensor hybrid histidine kinase similarity KEGG
DB: KEGG
  • Identity: 35.8
  • Coverage: 120.0
  • Bit_score: 76
  • Evalue 8.90e-12

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 399
ATGAGTGACGAGCGAAGGCCCCGGGTCTTGGTCGTGGACGACGAAGAGCGGGTCCGCGGTCTCCTGTGCGATATGCTGGCGCTCTGGGGCTGTCAGGCGGTCGAGGCGCCGAGTAGTGACGCCGCCTTGGCCCTCTTCGAGCAGGGCGACTACGATCTCGTCCTCACGGACTTCCTGATGCGGGGCCGGAACGGTCTCGACCTGATCCGGGATCTTCGGAGCCGGGACGCCGCGATCGGCGTCATCATGTTCACCGCGTCGGCCGCCGACTTCGACGCGGACAGCCGGGAGCTTGAGTTCACGCTGCTGCGCAAGCCGCTCCAGCTCGAGGCGCTCAAGAGTGCCGTCGGTCAGGCGCTCAGAGGCAGCGCGCGAACCACCCCGGCCGCGTTTTCCTGA
PROTEIN sequence
Length: 133
MSDERRPRVLVVDDEERVRGLLCDMLALWGCQAVEAPSSDAALALFEQGDYDLVLTDFLMRGRNGLDLIRDLRSRDAAIGVIMFTASAADFDADSRELEFTLLRKPLQLEALKSAVGQALRGSARTTPAAFS*