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13_1_20cm_4_scaffold_277_2

Organism: 13_1_20CM_4_Rokubacteria_70_14

partial RP 35 / 55 MC: 2 BSCG 36 / 51 MC: 1 ASCG 10 / 38
Location: comp(396..1685)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor Tax=GWA2_Rokubacteria_73_35_curated UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 429.0
  • Bit_score: 722
  • Evalue 5.00e-205
Putative RNA polymerase sigma factor id=4219874 bin=GWA2_Methylomirabilis_73_35 species=Bordetella petrii genus=Bordetella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 429.0
  • Bit_score: 722
  • Evalue 2.70e-205
  • rbh
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 54.7
  • Coverage: 433.0
  • Bit_score: 438
  • Evalue 2.90e-120

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1290
GTGGGATCGACCGACCGCGGGCAGGCGCCGGACGGCGTGCACGCGCGCGTGGCGGAGGCGTTCCGCCTGGAGTATGGGCGTGTGGTCGCCTCCGTGCTCCGGATCGTGCGCGACATGGACGCGGCGGAGGAGATCGTCCAGGAGGCGTTTGCGCAGGCGCTCGATCACTGGCCCGCGAACGAAACGCCGGACCGCCCGGGCGCCTGGCTCCTCACGACGGCACGGCGGCGCGCGCTGGATCGCCTGCGCCGCGCGCGGCGGGCCGGGGCGCGCGCCGACGCGCTCGCCTACCAGGCCGCGCTCGGCCGGATGGACGAGAGCCCTGACGTGACCGATCCCGAGGCGATCCCCGACGACCGGCTCCGGCTGATCTTCACCTGCTGTCATCCGGGCCTGCCGGCCGACAGCCGCGTGGCGCTGACGCTCAGGCTGGTGGGAGGCCTCTCGACGGCGGAGATCGCCCGGGCCTTTCTCGCGCCCGAGCCCACGATCGCCCAGCGGCTCGTGCGCGCCAAGCGAACGATCCGCGATCGTGGCTTTCCCTACGAGGTGCCCCAGGGGGTCGAGCTGCCCGCGCGCCTGCCGGCCGTGCTCGCGGTGGTCTATTTGATTTTCAACGAGGGCTACGCCGCGCACACGGGCGACGCCCTCGTGCGCCACGAGCTCTGCCAGGAGGCCATCCGTCTCGGACACATGCTCGCCGAGCTGATGCCCCTCGAGCCCGAGGTCCTCGGGCTCTTCGCACTGATGGAGCTTCAGGCCTCGCGGGCGGCGACGCGGACCGACGCCGACGGCAATCTCGTCCTGCTCGCGGATCAAGATCGGTCTCGCTGGGATCGGGCCCGCATCGCCCGCGGTCTCGCCGCACTCGATCGCGCCGGCCCACTGGAGCGCGCGGGCCCGTACCAGCTCCAGGCCGCCATCGCCGCATGTCACGCGCGCGCGGTCTCCTGGGAGACGACGGACTGGCCTCAGGTCGTCGCCCATTACCGCACCCTCGCCGAGGTCGCGCCGTCGCCGGTGATCGAGCTGAACCGGGCGGTGGCGATCGGCCTGGCAGAGGGGCCGGCGGCCGGGCTCGCCGCGCTCGACGCGGTCGACGCCTCGGCGCTGCGCGGCTATCATCTCTGGCCCGCCGCGCGCGCCGATTTCCTCCGCCGGCTCGGGCGATGGGCCGAGGCGGCCGTCGAGTACCGCCGCGCGCTCGAGCTCGCCGACAACGTCCGCGAGCAGAAGTTCCTCGCGGCCCGGCTCGCGGCCTGCGAGGCGGGCGGAGAGAGCGGGCGCTGA
PROTEIN sequence
Length: 430
VGSTDRGQAPDGVHARVAEAFRLEYGRVVASVLRIVRDMDAAEEIVQEAFAQALDHWPANETPDRPGAWLLTTARRRALDRLRRARRAGARADALAYQAALGRMDESPDVTDPEAIPDDRLRLIFTCCHPGLPADSRVALTLRLVGGLSTAEIARAFLAPEPTIAQRLVRAKRTIRDRGFPYEVPQGVELPARLPAVLAVVYLIFNEGYAAHTGDALVRHELCQEAIRLGHMLAELMPLEPEVLGLFALMELQASRAATRTDADGNLVLLADQDRSRWDRARIARGLAALDRAGPLERAGPYQLQAAIAACHARAVSWETTDWPQVVAHYRTLAEVAPSPVIELNRAVAIGLAEGPAAGLAALDAVDASALRGYHLWPAARADFLRRLGRWAEAAVEYRRALELADNVREQKFLAARLAACEAGGESGR*