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13_1_20cm_4_scaffold_1459_15

Organism: 13_1_20CM_4_Actinobacteria_68_12

partial RP 8 / 55 BSCG 11 / 51 ASCG 6 / 38
Location: 9975..10547

Top 3 Functional Annotations

Value Algorithm Source
sigma-70 family RNA polymerase sigma factor Tax=RBG_16_Actinobacteria_68_12_curated UNIPROT
DB: UniProtKB
  • Identity: 55.7
  • Coverage: 185.0
  • Bit_score: 208
  • Evalue 1.10e-50
RNA polymerase sigma-H factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14631759 bin=bin9_gal15 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15 similarity UNIREF
DB: UNIREF100
  • Identity: 39.0
  • Coverage: 172.0
  • Bit_score: 123
  • Evalue 1.90e-25
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 29.7
  • Coverage: 185.0
  • Bit_score: 88
  • Evalue 2.50e-15

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 573
TTGACAGAGACGGTTTCGGCGGCGCAGCTCGTCGCCCGTTGCCGCAACGGCGACCAGGAGGCGTGGGCGGGGCTCGTCGAGCGGTTTTCCCGCTATGTCTACGCGATCGCGACGCAGGGGTTCCGGCTGCGGGAGCACGACGCCGAAGACGTCTTTCAGGAGGTCTTTGCGAAGGTCTATGAGCGGCTCGATTCGCTCCGCAGCGACGAGGCGATCCAGCCCTGGATCGCCCAGCTCACCCGGCGTGTCTGTGTCGATCGCCTGCGAGCGGGCTCACGTGAGGAGACAACCGACGAGACCGAGCTGGCCGCAGACCCGGACGAGGACGCGATCGCCCGGATCGACGAGGCGCTCGACGTCCACGACGCGATGGCGGGCCTGCCCGAGAACTGCCGCGAGATCCTCGACCGTTTTTTTGCCCGCGACGAGACCTACCGGACGATCGGCGATGCGCTCGAATTGCCCGCCGGCACCATCGCCAGCCGGATTTCACGCTGTCTGGTCAAGCTGCGCGACGAACTCGAGGGAAGAAAACCGGTCCCAGCTCAGTCTGGTGGGCAGGTGAGCGTATGA
PROTEIN sequence
Length: 191
LTETVSAAQLVARCRNGDQEAWAGLVERFSRYVYAIATQGFRLREHDAEDVFQEVFAKVYERLDSLRSDEAIQPWIAQLTRRVCVDRLRAGSREETTDETELAADPDEDAIARIDEALDVHDAMAGLPENCREILDRFFARDETYRTIGDALELPAGTIASRISRCLVKLRDELEGRKPVPAQSGGQVSV*