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13_1_20cm_4_scaffold_1789_5

Organism: 13_1_20CM_4_Actinobacteria_68_12

partial RP 8 / 55 BSCG 11 / 51 ASCG 6 / 38
Location: 3333..3806

Top 3 Functional Annotations

Value Algorithm Source
Putative RNA polymerase ECF-subfamily sigma factor n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VQN2_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 159.0
  • Bit_score: 84
  • Evalue 1.40e-13
putative RNA polymerase ECF subfamily sigma factor Tax=RBG_16_Actinobacteria_68_12_curated UNIPROT
DB: UniProtKB
  • Identity: 46.4
  • Coverage: 153.0
  • Bit_score: 115
  • Evalue 7.80e-23
putative RNA polymerase ECF-subfamily sigma factor similarity KEGG
DB: KEGG
  • Identity: 38.4
  • Coverage: 159.0
  • Bit_score: 84
  • Evalue 3.90e-14

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 474
ATGGCGCAGATCGAGGGCCTGGTCGAACGGCTCTATCGGGAGCGGTACGTCGGCTTTCGCAATGCGCTCGCGCCAGTGGTGGGAAGCCGTGAGGCCGCGCACGACGTTGTGCAGGAGGCTTTTGCGAACGCGCTCGCCGAAGTCGGGAAGCTTCGCCGAGCAGAATCGCTCGCTCCGTGGGTTTGGCAGATCGCCCTCCGAATCGCGTTACGCCAGCGGCGCCGCGGCATGGAGATCGAGATTCCCGCCGATCTGTCGATTCTCGACGAGGAGCGTGACCCGGCTCTCGCGGCGGCTGTTCGGTCGCTGCCGCCGCAGCGGCGTCTGGTTCTGTTCTTGCGCTACTACGCCGATTTCACCTACGGCGAGATCGCCGAGGCGCTCGGGATCGCGGAAGGCACGGTCGCCGCCACCTTGTCGCAGGCACACGCGGCGTTGCTCGACCAGCTGATCAGCGAGGAGGTCGCACGATGA
PROTEIN sequence
Length: 158
MAQIEGLVERLYRERYVGFRNALAPVVGSREAAHDVVQEAFANALAEVGKLRRAESLAPWVWQIALRIALRQRRRGMEIEIPADLSILDEERDPALAAAVRSLPPQRRLVLFLRYYADFTYGEIAEALGIAEGTVAATLSQAHAALLDQLISEEVAR*