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13_1_20cm_4_scaffold_2535_7

Organism: 13_1_20CM_4_Actinobacteria_68_12

partial RP 8 / 55 BSCG 11 / 51 ASCG 6 / 38
Location: comp(4990..5652)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F144_CONWI similarity UNIREF
DB: UNIREF100
  • Identity: 63.7
  • Coverage: 212.0
  • Bit_score: 262
  • Evalue 4.00e-67
ECF subfamily RNA polymerase sigma-24 subunit; K03091 RNA polymerase sporulation-specific sigma factor Tax=RBG_16_Actinobacteria_68_12_curated UNIPROT
DB: UniProtKB
  • Identity: 80.0
  • Coverage: 220.0
  • Bit_score: 351
  • Evalue 9.10e-94
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 63.7
  • Coverage: 212.0
  • Bit_score: 262
  • Evalue 1.10e-67

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGCCGGCCCGTTCAGCCCCAGCGTATTCGGCTCAGCGACAGCAGCGCGAGCTTGCGGATCTCCAGCTCGTCGTCCGGGCCCGTAACGGCGACCAGGTTGCCCTCGACGCGCTGATCCGCCGCTACACGGGCTTCGTCCGTCTGAAGGCGAGCTCGTACTTCCTCGCCGGTGGCGATTCCGAGGACCTGATCCAGGAGGGCCTGATCGGCCTCTACAAGGCGGTGCGCGACTTCCGGCACGACAAGGAGACCTCGTTCCGAAGCTTCGCCGAGCTCTGCGTGACGCGCCAGATCATCACGGCGATCAAGACCGCTACGCGCTTCAAGCACTCGCCGCTGAACACGTACATCTCCTTCTCGAACACGCCGGCGGGCCAGGACTCCGATTCGGACGTGACCCTCGGCGATGCGCTCCCCGGCCCGACCGTCGACGACCCCTCGATCTGCGTGATCTCGACCGAGGAGCTGCAGAGCCTCGTGTTCTCGCTCGGCACCGGCCTCTCGAAGCTCGAGGCCGATGCCCTGAAGCTCTACCTCGAGGGCTCCTCCTACGAGGAGATGGCGGAGGAGCTCGGCTGCGACACCAAGACGATCGACAACGCGCTGCAGCGGGTCAAGCGAAAGGTGCTCCAGCACCAACAAGCGCGCCAGGTCCTGCAGTAG
PROTEIN sequence
Length: 221
MPARSAPAYSAQRQQRELADLQLVVRARNGDQVALDALIRRYTGFVRLKASSYFLAGGDSEDLIQEGLIGLYKAVRDFRHDKETSFRSFAELCVTRQIITAIKTATRFKHSPLNTYISFSNTPAGQDSDSDVTLGDALPGPTVDDPSICVISTEELQSLVFSLGTGLSKLEADALKLYLEGSSYEEMAEELGCDTKTIDNALQRVKRKVLQHQQARQVLQ*