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13_1_20cm_4_scaffold_3118_10

Organism: 13_1_20CM_4_Actinobacteria_68_12

partial RP 8 / 55 BSCG 11 / 51 ASCG 6 / 38
Location: comp(7746..8435)

Top 3 Functional Annotations

Value Algorithm Source
tpiA; triosephosphate isomerase (EC:5.3.1.1); K01803 triosephosphate isomerase (TIM) [EC:5.3.1.1] Tax=RBG_16_Actinobacteria_67_10_curated UNIPROT
DB: UniProtKB
  • Identity: 57.6
  • Coverage: 236.0
  • Bit_score: 258
  • Evalue 8.30e-66
Triosephosphate isomerase n=1 Tax=Synechococcus elongatus (strain PCC 7942) RepID=Q31NS8_SYNE7 similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 234.0
  • Bit_score: 231
  • Evalue 7.80e-58
triosephosphate isomerase similarity KEGG
DB: KEGG
  • Identity: 53.8
  • Coverage: 234.0
  • Bit_score: 232
  • Evalue 1.30e-58

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Taxonomy

RBG_16_Actinobacteria_67_10_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 690
GTGCTGATCGCGGGCAACTGGAAGATGTACAAGGGCCCGGGGGAGACGCGGGAGTTCTGTGCCGCGTTCGCGCCGCCCACCGGCGTCGATGCCGTGCTCTGTCCGCCGTTCGGGTCGCTCGGCGCGGCGGTGGCGAGCGGACACACGATCTTCGCCCAGAACGTGCACTGGGCCGACGAGGGCGCCTTCACGGGCGAGGTCTCGACGAAGATCCTGCTCGAGCTGGGCGCCCAGGGCGCGATCGTCGGCCACTCCGAGCGGCGGCAGTACTTCGGAGAGACGGACGAGACGGTGCGGATGCGCGCAGAGCATGCGCTCGAGGCAGGACTGCGGGTGATCGCCTGCGTCGGCGAGCTCGAGGCCGAGCGCGAGCGAGACGAGACCGAGGACGTGCTGCGACGCCAGGTGGGGGTGCTCTCGAGGCACGACAACCTCGTGGTCGCCTACGAGCCGGTCTGGGCGATCGGCACCGGGAAGACGGCGACACCGGAGATCGCGCAGGCGGCGCATGCCTTCATCAAATCCCTGCTCGACGTCCCGATCCTGTACGGCGGCTCGGTGAAGCCGGAGAACGCCGAGGAGCTGCTTGCCCAGCCCGAGGTCGACGGAGCGCTGGTCGGCGGCGCGTCGCTCGAAGTGGAATCGTTCACCGCGATTTGCGAGACGGCGGCACGACTTTCCCGCTTGTAG
PROTEIN sequence
Length: 230
VLIAGNWKMYKGPGETREFCAAFAPPTGVDAVLCPPFGSLGAAVASGHTIFAQNVHWADEGAFTGEVSTKILLELGAQGAIVGHSERRQYFGETDETVRMRAEHALEAGLRVIACVGELEAERERDETEDVLRRQVGVLSRHDNLVVAYEPVWAIGTGKTATPEIAQAAHAFIKSLLDVPILYGGSVKPENAEELLAQPEVDGALVGGASLEVESFTAICETAARLSRL*