ggKbase home page

13_1_20cm_4_scaffold_6449_3

Organism: 13_1_20CM_4_Actinobacteria_68_12

partial RP 8 / 55 BSCG 11 / 51 ASCG 6 / 38
Location: 2286..3161

Top 3 Functional Annotations

Value Algorithm Source
Probable DNA repair protein Toce_0248 n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S0A6_THEOJ similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 284.0
  • Bit_score: 238
  • Evalue 6.20e-60
Ku protein; K10979 DNA end-binding protein Ku Tax=RBG_16_Actinobacteria_67_10_curated UNIPROT
DB: UniProtKB
  • Identity: 70.7
  • Coverage: 287.0
  • Bit_score: 394
  • Evalue 1.20e-106
DNA end-binding protein Ku similarity KEGG
DB: KEGG
  • Identity: 45.1
  • Coverage: 284.0
  • Bit_score: 238
  • Evalue 1.70e-60

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RBG_16_Actinobacteria_67_10_curated → Acidimicrobiia → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 876
ATGAGAACGATCTGGAACGGATCCATCAGCTTCGGCCTGGTCAACATCCCCGTCGGGATGGCCCTGGCTACCAAGCCGGCTGCCCGGCAATCGGACGTGTCGTTCCGGATGCTCCACCGGGAGTGCGGGACGCCGATCAAGAACAAGCGCTGGTGCCCTCAGCACGACCGTGAGGTCTCGAACGACGAGATCGTCAAGGGCTGGGAGGTGGCGAAAGGGCAGTTCGTCTTCGTCGAGGATTCCGACCTCGAGGCGCTCGAGACCGCAGATGACTCGCGAACGATCGCGATCACGCGTTTCGTCGAGCTCGAACAGGTCGACCCGATCTACTTCGACCGCACCTACTTCCTCGCGCCGGCCGACGCGGTCGCGCAGCGGCGGCCCTACGTGCTGCTGCTGGAGGCGATGAAGGAGACGAACACGGCTGCGGTCGGCAAGTTCGTCCGTCAGGGTGCCGAGCACTTCTGCCTGATCCGGCCGAAAGGGAACGCGCTCGCGCTCGAGACGCTCTTCCTCGCCGAGGACGTTCGCTCGCAGGCGGAGATCGAAGAGGCGGTCGAGGAGATCGACGTCAAGGACGCCGAGCTGGAGCTGGCGCGCCAGGTGATCGGAAGCCTGGCGGCCGACTTCGATCCGCAAGAACTCGTGAGCGACTACCGGCGCGATCTGAAGGCCCTACTCGAGGCCAAGCTCGCCGGCGAGGAGATCAAGGCGCCGGAGCCGGTCGAGGAGAAGGCGCCGGTGATCGACCTGATGGAGGCGCTCAAGGCGAGCGTGGCCGAGGCCCAAGGCAAGAAACCGGCCAAGGCAGCCGCCAAGAAGACGAAAGCCGCCTCGTCGGGCGGCTCGCGTCGCAAAGTCGCCGCGCGCAAGTAG
PROTEIN sequence
Length: 292
MRTIWNGSISFGLVNIPVGMALATKPAARQSDVSFRMLHRECGTPIKNKRWCPQHDREVSNDEIVKGWEVAKGQFVFVEDSDLEALETADDSRTIAITRFVELEQVDPIYFDRTYFLAPADAVAQRRPYVLLLEAMKETNTAAVGKFVRQGAEHFCLIRPKGNALALETLFLAEDVRSQAEIEEAVEEIDVKDAELELARQVIGSLAADFDPQELVSDYRRDLKALLEAKLAGEEIKAPEPVEEKAPVIDLMEALKASVAEAQGKKPAKAAAKKTKAASSGGSRRKVAARK*