ggKbase home page

13_1_20cm_4_scaffold_10947_4

Organism: 13_1_20CM_4_Verrucomicrobia_55_9

partial RP 14 / 55 MC: 2 BSCG 9 / 51 MC: 1 ASCG 4 / 38
Location: 5278..8427

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase UNIPROT
DB: UniProtKB
  • Identity: 82.8
  • Coverage: 999.99
  • Bit_score: 1753
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' n=1 Tax=Chthoniobacter flavus Ellin428 RepID=B4D9K5_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 82.8
  • Coverage: 999.99
  • Bit_score: 1753
  • Evalue 0.0
rpoC; DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 71.7
  • Coverage: 999.99
  • Bit_score: 1521
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Chthoniobacter flavus → Chthoniobacter → Spartobacteria → Verrucomicrobia → Bacteria

Sequences

DNA sequence
Length: 3150
ATGGGCCACATCGAGCTTGCCGTCCCTGTTTCGCACATTTGGTTTTACAAGTGCATGCCGTCGCGCATCGGCCTGATGCTCGACATGAGCGCGCGTCAGCTCGAGCGCGTCATTTATTACGAGGACTACATCGTCATTGATCCGGGCAAGACGCCGCTGCAAAGGGCGCAACTGCTGAACGAAGTCGAGTACCGCGAAGCGCAGGAACAATACGGCGAGGATTTCGTGGCCGGGATGGGCGCGGAAGCGATAAAGAAGCTTCTCTCCGAGATCGAGCTCAACAAGCTGAACAAAGAGCTGGAAAAGGCGATGGGCGCGACCAAGAGCAAACAGATTCGTAAGAAGCTCGCGAAGCGGCTCAAGCTCGTGCAGGGCTTCATGTCATCGCACGCGCGGCCGGAGTGGATGATTCTCGACGTGCTTCCGGTCATCCCGCCTGATCTGCGTCCGCTCGTTCCACTGGAAGGTGGACGTTTCGCGACCTCCGACCTGAACGATCTCTACCGTCGCGTCATCAACCGGAACAATCGACTCAAGAATTTGCTCCAGCTCAAAACCCCGGACGTCATCATTCGAAACGAAAAGCGAATGTTGCAGGAAGCGGTGGACGCGTTGTTTGACAACGGCCGCCATGGCCGGGCGGTCACCGGCGCCGGCAACCGCCCGCTGAAATCACTCAGCGACATGCTCAAGGGCAAAGGCGGACGTTTCCGCCAGAATTTGCTCGGCAAGCGCGTCGATTATTCGGGCCGATCAGTGATTGTTATCGGGCCCGAACTCAAACTGCATCAGTGCGGTTTGCCCAAGAAAATGGCGCTCGTTTTGTTCGAGCCGTTCATCATTCGGCGACTGAAAGACCTCGGCTACGTCCACACCGTGCGCAGCGCGAAGAAAATGATCGAGCGCCAGACACCGGAAGTCTGGGACATACTTGATGAAGTCACCCGCGGACATCCGGTGTTGCTCAACCGCGCGCCGACGCTGCATCGATTGTCGATCCAGGCCTTCGAGCCACAATTGATCGAAGGCGAAGCGATCCGGATTCACCCGCTCGTCTGCACCGCTTACAATGCGGACTTCGATGGCGATCAAATGGCTGTGCACGTGCCGCTCTCTGTCGAGGCGCAATTGGAAGCGCGCATGCTGATGCTCGCTCCGAATAACATTTTCTCGCCGTCCAGCGGCAAACCGATCACGACGCCGTCGCAAGACATCACGCTCGGTTGCTATTACATGACGCAGAATCCGCGCGGAGCGGTGAAAAAGGACGGCCATCTGCCGCTCTTCGCCGAGCCAGTCGAAGTGGAATTCGCCATGGCCGAAGGCTCGGTCAAAACACACGATCGAATTCGTTTTCAGAATCCGGATCGCGGACGACAAACTATTTTCGGCACCGCGGAAGCGAAGACGATCGAAACGACGGCCGGTCGCGTCATTTTCAATCAGATTTGGCCAAAGGAACTCGGGTTTTTCAACAAGGCCGCCGGCAAAAAGCAACTCAGCGACATTATCTGGCGCTGCTATCAGGTCGCAGGACCAGCGGCAACGGTCGCGACACTCGATAAGCTGAAAGAGCTTGGCTTCACCGAGGCGACACGGGCCGGAATCTCGATTGGAATTTCGGACATGATCATTCCGAAGGAAAAAGAGACCGAGCTCGAAAACGCTTATAAACAGATTCGCCAGGTCGAGCAGCAATATCGAAAAGGCATCATCACGGACGGCGAGCGTTACAACAAGATCATCGATATCTGGACGCACGCCGGCGACGAGATTTCGAACGTCATGTTCCGTACATTGGAACACAACGACGGCCGCAAAGAATTGAATCCAGTTTATTTGATGGTTGACTCCGGGGCGCGCGGCAATCGCCAACAGGTGCGTCAGCTCGCTGGCATGCGCGGCTTGATGGCGAAACCGAGCGGAGAAATTATCGAGCGACCGATCACTTCCAACTTCCGCGAAGGTTTGAGCGTGCTCGAGTATTTCATCTCGACCCACGGCGCGCGCAAAGGTCTGGCCGACACCGCGCTCAAAACTGCGGACTCCGGTTATCTCACCCGTAAATTGGTCGACGCGGCACAAGACGTTATTATCAATATAGAAGATTGCGGCACCGTAAACGGAATCGTCGTCCGCTCGATTTACGAGGGCGACGAGGAAGTTGTCGATCTTGCCCAGCGAATCATCGGCCGCGTTAGCTGCGAAACAATCGCGGACCCAGTGGACAAGAAGAAGAAGATCGTCAAAGCCAACCAACTCATCGACGAGAAAATCGCGGCAGATTTGCAGCGCATCGGTGTAGAGAGCTTGAAGATCCGCTCGGTGTTGACGTGCGAATGCGGTCGCGGCGTTTGCGGAATGTGTTACGGACGAAATCTGGCCACCGGCCAGTATGTGAAAATGGGCGAAGCGGTTGGAATTATTGCCGCTCAATCGATCGGCGAACCAGGAACGCAGCTGACGATGCGAACATTCCACATCGGCGGAACGGCGAGCCAGACTTTCAAACAGCCGATCATTAAAGCGAAGAATGACGGCGCGGTGCGCTTCAACGATTTGCGCACAGTGCAAGCGCTCGATGGCAGCTGGATCGTGTTGAGCAAGAATGGCTCGATCAGCGTGCACAACGCGGAAGGTCGTGAGCTCGAGCGCTACAACGTCGTTATCGGTTCAATGATTTCGAAGGACGACGGCGCGAATGTGAAAAAAGGCGAGACGTTCGTTCAATGGGATCCTTACAACGTCCCGATTCTGACCGACAGGAGCGGCAAGATTGAATTCCGCGACATGATCGCTGGGGTCACGATCAAGCGCGATGTCGATGAAGCAACCGGCTTGATGGGCACCGTCATCATCGAGCACAAGGAAGATTTGCATCCGCAAATCGTCATTGTCGGCGACAAGAAAGAAGTGCTGGCCAGCTATTCGATTCCAGCGGGCGCGCACGTCATTGTCGAGGAAGACCAAAAAATTCGAGCAGGCGCATTGTTGGCAAAAACGCCGCGAAAAGTCGCCAAGACGAAAGACATCACCGGCGGTCTGCCACGCGTTGCCGAATTGTTCGAAGCGCGCCGTCCAAAAGACGCGGCCGAGATTGCAAAGATCGACGGCGTTGTCGAAATGGGCGGGACCGTTCGCGGCAAGCGT
PROTEIN sequence
Length: 1050
MGHIELAVPVSHIWFYKCMPSRIGLMLDMSARQLERVIYYEDYIVIDPGKTPLQRAQLLNEVEYREAQEQYGEDFVAGMGAEAIKKLLSEIELNKLNKELEKAMGATKSKQIRKKLAKRLKLVQGFMSSHARPEWMILDVLPVIPPDLRPLVPLEGGRFATSDLNDLYRRVINRNNRLKNLLQLKTPDVIIRNEKRMLQEAVDALFDNGRHGRAVTGAGNRPLKSLSDMLKGKGGRFRQNLLGKRVDYSGRSVIVIGPELKLHQCGLPKKMALVLFEPFIIRRLKDLGYVHTVRSAKKMIERQTPEVWDILDEVTRGHPVLLNRAPTLHRLSIQAFEPQLIEGEAIRIHPLVCTAYNADFDGDQMAVHVPLSVEAQLEARMLMLAPNNIFSPSSGKPITTPSQDITLGCYYMTQNPRGAVKKDGHLPLFAEPVEVEFAMAEGSVKTHDRIRFQNPDRGRQTIFGTAEAKTIETTAGRVIFNQIWPKELGFFNKAAGKKQLSDIIWRCYQVAGPAATVATLDKLKELGFTEATRAGISIGISDMIIPKEKETELENAYKQIRQVEQQYRKGIITDGERYNKIIDIWTHAGDEISNVMFRTLEHNDGRKELNPVYLMVDSGARGNRQQVRQLAGMRGLMAKPSGEIIERPITSNFREGLSVLEYFISTHGARKGLADTALKTADSGYLTRKLVDAAQDVIINIEDCGTVNGIVVRSIYEGDEEVVDLAQRIIGRVSCETIADPVDKKKKIVKANQLIDEKIAADLQRIGVESLKIRSVLTCECGRGVCGMCYGRNLATGQYVKMGEAVGIIAAQSIGEPGTQLTMRTFHIGGTASQTFKQPIIKAKNDGAVRFNDLRTVQALDGSWIVLSKNGSISVHNAEGRELERYNVVIGSMISKDDGANVKKGETFVQWDPYNVPILTDRSGKIEFRDMIAGVTIKRDVDEATGLMGTVIIEHKEDLHPQIVIVGDKKEVLASYSIPAGAHVIVEEDQKIRAGALLAKTPRKVAKTKDITGGLPRVAELFEARRPKDAAEIAKIDGVVEMGGTVRGKR