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13_1_20cm_4_scaffold_1234_18

Organism: 13_1_20CM_4_Actinobacteria_69_9

partial RP 30 / 55 MC: 2 BSCG 35 / 51 ASCG 12 / 38 MC: 1
Location: comp(14609..15289)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Actinosynnema mirum (strain ATCC 29888 / DSM 43827 / NBRC 14064 / IMRU 3971) RepID=C6WJE3_ACTMD similarity UNIREF
DB: UNIREF100
  • Identity: 70.2
  • Coverage: 228.0
  • Bit_score: 314
  • Evalue 9.00e-83
  • rbh
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ACU34575.1}; Flags: Precursor;; TaxID=446462 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Ac UNIPROT
DB: UniProtKB
  • Identity: 69.7
  • Coverage: 228.0
  • Bit_score: 312
  • Evalue 3.70e-82
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.7
  • Coverage: 228.0
  • Bit_score: 312
  • Evalue 7.40e-83

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Taxonomy

Actinosynnema mirum → Actinosynnema → Pseudonocardiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 681
GTGAAGATCCTGGTGGTCGACGACGAACGTGCCGTGCGCGAGTCGCTGCGACGTGCGCTCGAGCTCGAGGGCTACGAGATCGAGCTCGCCGGCGACGGCAAGGAGGCGCTCGCCACGCTCGGCCGCGACGACTCGCAGCCCGATGCGGTCATCCTCGACGTCCTCATGCCCGGGGTCGACGGCCTCGAGGTCTGCCGACGCCTGCGTGCGACGGGCAATCACGTTCCCGTCCTGATGCTGACCGCGCGCGACGAGGTCGAGAACCGCGTCGCAGGTCTCGACGCGGGAGCGGACGACTACGTGACGAAACCGTTCGCGCTCGAGGAGCTGCTCGCGCGGGTCCGCGCGTTGCTCCGTCGAACCGCCGACACCGACGGCGGCGAGGTGCTCTCGTTCGCCAACCTCACGCTCGACCTCGGAACGCGCGACGTGCGCCGCGGCGGCCGACCCATCGAGCTGACGCGCACGGAGTTCGCGTTGCTCGAGCTGTTCCTGCGGAATCCGCGCCAGGTGCTGACGCGCTCGATCATCTTCGAGCGCGTCTGGGGCTACGACTTCGGCTTCGCGTCGAACTCGCTCGACGTCTACATCGGCTATCTCCGGCGCAAGACCGAAGCCGGCGGCGAACCGCGCGTGATCCACACGGTTCGCGGCGTCGGCTACGCGCTCCGCGAGCAATGA
PROTEIN sequence
Length: 227
VKILVVDDERAVRESLRRALELEGYEIELAGDGKEALATLGRDDSQPDAVILDVLMPGVDGLEVCRRLRATGNHVPVLMLTARDEVENRVAGLDAGADDYVTKPFALEELLARVRALLRRTADTDGGEVLSFANLTLDLGTRDVRRGGRPIELTRTEFALLELFLRNPRQVLTRSIIFERVWGYDFGFASNSLDVYIGYLRRKTEAGGEPRVIHTVRGVGYALREQ*