ggKbase home page

13_1_20cm_4_scaffold_13630_5

Organism: 13_1_20CM_4_Actinobacteria_69_9

partial RP 30 / 55 MC: 2 BSCG 35 / 51 ASCG 12 / 38 MC: 1
Location: comp(4102..5013)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport system inner membrane protein {ECO:0000313|EMBL:KEZ77512.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaerace UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 289.0
  • Bit_score: 379
  • Evalue 5.60e-102
spermidine/putrescine ABC transporter permease id=4195233 bin=GWC2_Chloroflexi_73_18 species=unknown genus=Amycolatopsis taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 61.7
  • Coverage: 303.0
  • Bit_score: 361
  • Evalue 6.60e-97
  • rbh
potH; binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 58.9
  • Coverage: 280.0
  • Bit_score: 349
  • Evalue 9.50e-94
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Salinisphaera hydrothermalis → Salinisphaera → Salinisphaerales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
GTGGCAACGCAGGCGTACGAGGCGGGCCGGCCCGAAGGGTCGGCTCGCCGTCGCTTGTCGGCGGCGTTGTGGCGTCGGCCGTGGCTGCGCGCGGTCGCGCTGCTGCTGCCGCCGCTCGGCTGGATGGCCGTCTTTTACCTCGCCGCGCTCGCCGTGCTGTTCGCGTCGGCGTTCTGGAGCATCGACTCGTTCACCGGAAAGCTGACCCACACGTGGACGTGGGACAACTTCCACACGATCTTCAGCGACCCGACGTACCGCCAGATCGCCTTCCGCACGATCTGGATGGCGGCCGCGGTCACGGTGACCGACGCGATCGTCGCATTCCCGTTCGCGTACTACATGGCGCGCATCGCCGGCCCGCGGCAGCGCACGCTCCTGTTCGTGCTCGTCCTGCTGCCGCTCTGGTCGAGCTATCTCGCGCGGATCTACGCCTGGCGCCTCATCCTCAACCACGACGGCGCGCTCAACTGGACGCTCGGGAAGCTCGGGCTTCCGGCCCAGGGCTGGGCGTTCACGAACACGGCGATGTGGATCGTGTTCTCGTACATCTGGCTGCCGTTCATGATCCTCCCCGTCTACGCCGCGCTCGAGCGGATCCCGGACTCGTACCTCGAGGCCTCGCGCGATCTCGGTGCACGAAACTGGACGACGTTCCGCCGTGTGATCGTCCCGCTCGCACTCCCCGGCATCGTCGCCGGCTCCATCTTCACGTTCTCGCTGACGCTCGGCGACTACATCACCCCGTCGCTCGTCGGCAACGTCGACTTCATCGGGAACGTCATCTACCGCAACGTCCTCGGGCTGACGAACAACCTTCCGTTCGCGGCGGCGTACGCAACGATTCCGCTGGCCGTGATGGGGCTGTATCTGATCGTCGCGAAGCGGCTCGGCGCATTCGAGGCGTTGTGA
PROTEIN sequence
Length: 304
VATQAYEAGRPEGSARRRLSAALWRRPWLRAVALLLPPLGWMAVFYLAALAVLFASAFWSIDSFTGKLTHTWTWDNFHTIFSDPTYRQIAFRTIWMAAAVTVTDAIVAFPFAYYMARIAGPRQRTLLFVLVLLPLWSSYLARIYAWRLILNHDGALNWTLGKLGLPAQGWAFTNTAMWIVFSYIWLPFMILPVYAALERIPDSYLEASRDLGARNWTTFRRVIVPLALPGIVAGSIFTFSLTLGDYITPSLVGNVDFIGNVIYRNVLGLTNNLPFAAAYATIPLAVMGLYLIVAKRLGAFEAL*