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13_1_20cm_4_scaffold_18862_8

Organism: 13_1_20CM_4_Actinobacteria_69_9

partial RP 30 / 55 MC: 2 BSCG 35 / 51 ASCG 12 / 38 MC: 1
Location: 6093..6722

Top 3 Functional Annotations

Value Algorithm Source
Putative sigma factor SigB regulation protein rsbU n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9W6L7_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 53.8
  • Coverage: 197.0
  • Bit_score: 184
  • Evalue 1.30e-43
Putative sigma factor SigB regulation protein rsbU {ECO:0000313|EMBL:EFL22548.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomy UNIPROT
DB: UniProtKB
  • Identity: 53.8
  • Coverage: 197.0
  • Bit_score: 184
  • Evalue 1.80e-43
putative GAF sensor protein similarity KEGG
DB: KEGG
  • Identity: 52.9
  • Coverage: 189.0
  • Bit_score: 170
  • Evalue 7.20e-40

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Taxonomy

Streptomyces himastatinicus → Streptomyces → Streptomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 630
GTGAGCGACGACCTGCGCAGCGCGGTCGCCGCCGGCGTGCTCGGCGCCGAGACGAATTATCGCGAGCTGCTGCAGTCGATCGTCGCGGTTGCCCGCGCGATCTTCCGAGCCAAGGCGTCGTCGATCTTCCTGCTCGACGAGGAGAGCGACGAGCTCGTCTTCGAAGCGGTGGCGGGGGAGGGCTCCGAGTCGCTGGTCGGCCGCCGCTTCCCGTCGAGCACGGGCATCGCCGGGTTCGTGCTCGTCAGCCGCCAGCCGCTCGTGATCGAGGACGTGCTCGAAGACCCGCGCTTCTCGCGCGAGACCGCCGAGAGCACCGGCTTCGTCCCGAAGGGGTTGATGGCGGTGCCGCTGCTGCACGAGGAGCTCGCGCTCGGCGTGCTCGAGGTCCTCGACCGCCCGAGCGAGGCTCGCTTCACGCTCGAGGAGATGGACCTGCTCGGCCTGTTCGCCGGCCAGGCCGCGATCGCGCTCGACCTCCTCCAGCGGGCGCGCCGTGCCCAGGCGACGCTCGACGACCGCGGCGAGCTCGCGGTGCTCGCGCGGGTGGCGCAGAAGCTGGAGCAGCGCCGCGATGAAGCCGGCGCTGCGCTCGCCTTGCTCTCGGCGCTAGAACGCGTGCTCGAATGA
PROTEIN sequence
Length: 210
VSDDLRSAVAAGVLGAETNYRELLQSIVAVARAIFRAKASSIFLLDEESDELVFEAVAGEGSESLVGRRFPSSTGIAGFVLVSRQPLVIEDVLEDPRFSRETAESTGFVPKGLMAVPLLHEELALGVLEVLDRPSEARFTLEEMDLLGLFAGQAAIALDLLQRARRAQATLDDRGELAVLARVAQKLEQRRDEAGAALALLSALERVLE*