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13_1_20cm_4_scaffold_850_1

Organism: 13_1_20CM_4_Actinobacteria_69_9

partial RP 30 / 55 MC: 2 BSCG 35 / 51 ASCG 12 / 38 MC: 1
Location: comp(1..609)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma 70 n=1 Tax=Patulibacter americanus RepID=UPI0003B5C1FE similarity UNIREF
DB: UNIREF100
  • Identity: 49.1
  • Coverage: 220.0
  • Bit_score: 181
  • Evalue 1.10e-42
RpoD subfamily RNA polymerase sigma-70 subunit; K03086 RNA polymerase primary sigma factor Tax=RBG_16_Actinobacteria_68_12_curated UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 212.0
  • Bit_score: 219
  • Evalue 5.00e-54
RpoD subfamily RNA polymerase sigma-70 subunit similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 223.0
  • Bit_score: 181
  • Evalue 2.30e-43

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Taxonomy

RBG_16_Actinobacteria_68_12_curated → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 609
GTGACTGAACTGACCAAGCTTGCTGAACTGGAACCCCGCGCCTTCGTCGACCAGGCGGAGGAGCTCGGAGAGCTCGAGGAAGAGGTCCTCGAGGCGTACGCGCACGAGCACGAGCTCGACGACGAGGAGGTTGCACACCTCCGCGGCGAGCTCGAGGAGCGCGGCGTCGACCTGATCTCGGCTCCCCATGCCGAGCCGGTGGCCCGTGCCGTGGCGCCGGTGAGCGGTGCGACCGACAGCCTCACGCTGTTCATGAACGAGGCCGGCCGCTACCCGCTGCTCACGGCGGCCGAAGAGGTCGCGCTGGCGAAGCGCGTCGAGCGCGGCGACATCGCGGCGAAGGAGCGGATGATCAACTCGAACCTGCGTCTCGTGGTCTCGATCGCGAAGCGCTATCAGGGCCACGGGCTGCAGCTCGGCGATCTGATCCAGGAGGGCGTGATCGGACTGAACCGCGCCGTCGAGAAGTTCGACTGGCGCAAGGGCTTCAAGTTCTCGACCTACGCCACTTGGTGGATCCGCCAGGCCTGCCAGCGCGCGGTCTCGAACCAGTCCGCGACGATCCGCGTTCCGACCCACGTCCACGAGCGGCGCGTGAAGCTCAACCGC
PROTEIN sequence
Length: 203
VTELTKLAELEPRAFVDQAEELGELEEEVLEAYAHEHELDDEEVAHLRGELEERGVDLISAPHAEPVARAVAPVSGATDSLTLFMNEAGRYPLLTAAEEVALAKRVERGDIAAKERMINSNLRLVVSIAKRYQGHGLQLGDLIQEGVIGLNRAVEKFDWRKGFKFSTYATWWIRQACQRAVSNQSATIRVPTHVHERRVKLNR