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13_1_20cm_2_scaffold_85_3

Organism: 13_1_20CM_2_Rokubacteria_70_7

partial RP 17 / 55 MC: 1 BSCG 11 / 51 ASCG 7 / 38
Location: comp(2784..5990)

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated UNIPROT
DB: UniProtKB
  • Identity: 76.9
  • Coverage: 999.99
  • Bit_score: 1621
  • Evalue 0.0
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 50.2
  • Coverage: 883.0
  • Bit_score: 815
  • Evalue 1.70e-233
Transcription-repair-coupling factor n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HRU9_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 42.8
  • Coverage: 999.99
  • Bit_score: 836
  • Evalue 4.10e-239

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 3207
ATGTTGAGACAGTGGCCGCCTTTTGACGAGCTGGCGAAAGCCTTCGCCGAGGGGGTCGTCTGTCTGCGCGTCGCCGGCCTCACCGGCTCGGCCCGGGCGCTCGCCGTCGTCGAGCTGCTCCACGCGCATCCCCGCCCCGCGCTCATCGTGGCCGCCTCCCTCGCCGAGGCCCGTCACTGGGCCCAGGATCTGAGGTTCTTCGGCGCCCCCGCCGTCGAGTTCGCCGAGCGGGAGCCGCGCCTCTGGCGCGGCGGCCACGAGCGTGAGGCCGACGCCGAGCGCGCGCTCATCTGCCGGCGCCTGCTCGCCGGCGAGCCGATCGCCGTCGTCGCCACGCCGGCCGCGCTGGACGTTCCGCTGCCGGCGCCCACGGTATTCGGCGCCGGCACCCTCCGGTTCTCGGTTGGCGACAGCCTCGACCGAGAGCTTCTCCTGGAGGCGCTCCAGGGCGCCGGCTACGAGCGCGTCGACACGGTGGTGGAGGTGGGGCAGTGGAGCGTGCGTGGCGGCATCGTGGACATCTTCACGCCGACGCACCCGGCCCCGGGCCGGCTCGAGTTCGTCGGCGACGAGATCGAGTCGATCCGACTCTTCGACCCGACCGCCCAGCGCTCCCAGGCTCACCTCGACGAGCTGGTCGTCCTGCCCCTGGACGCCGGCGGCGCCCCGGCCGAGACGGCGGGGACGTCGAGCCTGCTCGAGTACCTGCCCGCGCCAGCGCCCGTCGTCGTCGACTCGCCCCGCCTCCTCGACGAGCCCACCGAGGAGGCGCCCGACCGGCTTCCGCTGGGCGAGCGTCTCGGCGAACGGCAGCGCATCGAGCTTGAGCTGGTCGCCGGCGCGTCCGGCCCATCCGAGTTCACCCTCGACACGCACTCGGTCGGCCGCTACTCCGGCAAGTTCGCCCAGCTGGCCGAGGAGCTGGCGCAGTGGCGCCGCGAGGGCTTCCGCCTGCGCCTGGTGGCTGCCGATGCCCACCAGGCCGACCACCTGCGCCAGATCCTCCACGAGCACGGCCTGGAGGCGCTCACGCCGGCGACGCTCGACGGGCCCGAAGGGCTCGCGATCGTCGTGGGCGAGTGCGGGACCGGGTTCTCCATCCCCGCCCTCGGCTTCATTCTGCTCACCGAGACGGAGATGTTCGGCGCCCGGCGTCGCACGCTCAAGCGGCCTCGGTTCCAGCGCGGCTCGCCCCTCAGCGCCTTCACCGACCTCGCGCTCGGCGACCTCGTCGTTCACGAGGACCACGGCATCGGGCGCTACCTCGGGCTCAAGACGATGAGCGTCGGGGGCCGCGAGGGCGATTTCTTGCTGCTCGAGTACGCGGACGGGGGGCAGCTCTACCTGCCCGTCGAGCGGCTCGATCTCATCTCCAAGTACCTGGGCGGGGACGCCGGCGCGGCCCGCCTGGACCGCCTGGGCGGCGCGTCCTGGCAACGGGTCAAGGAGTCGGTGCGCGCGGCCCTGCGAGACATGGCCGAGGAACTGCTCAAGCTCTACGCGCGACGCGCCGTGGCCGAGGGCCACGGCTTCTCCCCGGACGCGCCCTGGCAGCGCGAGTTCGAGGCCGCCTTCCGCTTCGAGGAGACGCCCGATCAGCTGCGCGCCATCGAGGACGCCAAGCGGGACATGGAGGCGGAGCGCCCGATGGACCGCCTGGTCGCCGGTGACGTGGGCTACGGCAAGACCGAGGTGGCGCTCCGCGCCGCCTTCAAGGCCGTCGCCGACGGCACCCAGGTCGCCGTGCTGGTGCCCACCACGGTGCTGGCCCAGCAGCACTTCGGGACGTTCAGCGAGCGGTTCGCGCCGTTTCCCGCCCGGGTCGAGCTGCTGTCGCGCTTCCGCGCGCCGGCGGAGCAGAAGACCGTGATCGAGGGGCTCCGCACCGGCGCCGTGGACGTCGTGATCGGCACCCACCGGCTGCTCTCCAAGGACGTCACCTTCAAGAACCTGGGCCTGCTGATCATCGACGAGGAGCACCGGTTCGGCGTCGCCCACAAGGAGCGGCTCAAGCAGTTCCGGGCGTCGGTGGACGTCCTCGCGCTCACCGCCACGCCGATCCCGCGCACGCTCTACATGTCACTCTCGGGCGTGCGCGACATGTCGGTCATCGAGACGCCGCCGCTCGACCGGCTGCCGGTGGAGACGATGATCCGCCGCTTCAGCAAGGCGGTCATCAAGGAGGCGCTCGAGCGTGAGCTGGCGCGCGGCGGGCAGGTCTTCTTCGTCCACAACCGCGTCCAGTCGTTGCCCTCGATGACGCGCCTGCTCCAGGAGCTCGTCCCCGACGCCCGCATCGCGATGGCGCATGGCCAGATGCGGGAGCGCGAGCTGGAGGCGGCCATGGTCAAGTTCGTGAGCGGCCAGGCGGACGTGCTGGTCTCGACGGCGATCGTCGAGTCCGGGCTCGACATCCCGGCGTCGAACACGATTGTCGTCAACCGCGCCGACCGCTTCGGCCTGGCCCAGCTCTACCAGTTGCGGGGCCGCGTGGGGCGGGAGCGCCAGCAGGCCTACTGTTATCTGCTGGTGCCGGCCGACGGCCGGGTCGATGAGCAGGCTCAGCGCCGACTCCGCGCCTTGCAGGAGCTCACGGAACTCGGCTCGGGCTTCAAGCTGGCCCTCCGCGACCTCGAGATCCGGGGCGCCGGCAACCTCCTGGGGGCCCAGCAGCACGGCCATATCGCCGCCGTCGGCTTCGATCTTTACTCGAAGCTTCTGACCGAGGCCGTGCGAGAATTGAGGGGCGAACCGGCGGCGACGACGGTCGAGCCGGTCGTCAGTGTCGACGTCGAAGGCTTCTTGCCCGAGGACTATGTCCCCGAAGTCAACCAGCGTCTGGCGCTTTACAAGCGGCTGGCCGGTGCTCAGGCCGACGCCGAGGTCGCCGATCTGCGCGCCGAGCTTTCGGATCGCTTCGGTTCGCTCCCCCAGCCCGCCCAGCAGCTCCTCGACATCGTGCGCATCCGCGTGGCGGCGCGGGCTCTGGGTATCGAACGGATCGAGGCTGGCGAGGGCCGGGCCCTCGTCACGTTCTCTCCGGCGACGCCCATCGAGCCGCAGCGGCTGGTGGGCGCCATCCAGAGGAGTCGGGGACGGCTCCTGATGAAGCGCGAGTTCACGCTGGAGGCGACCATCGACCGCGGCGAGTGGCCGGTGGTGCGCGACTCCCTGCTCCGCCTGCTTAGCGAGCTGGCGCGCCCGTGA
PROTEIN sequence
Length: 1069
MLRQWPPFDELAKAFAEGVVCLRVAGLTGSARALAVVELLHAHPRPALIVAASLAEARHWAQDLRFFGAPAVEFAEREPRLWRGGHEREADAERALICRRLLAGEPIAVVATPAALDVPLPAPTVFGAGTLRFSVGDSLDRELLLEALQGAGYERVDTVVEVGQWSVRGGIVDIFTPTHPAPGRLEFVGDEIESIRLFDPTAQRSQAHLDELVVLPLDAGGAPAETAGTSSLLEYLPAPAPVVVDSPRLLDEPTEEAPDRLPLGERLGERQRIELELVAGASGPSEFTLDTHSVGRYSGKFAQLAEELAQWRREGFRLRLVAADAHQADHLRQILHEHGLEALTPATLDGPEGLAIVVGECGTGFSIPALGFILLTETEMFGARRRTLKRPRFQRGSPLSAFTDLALGDLVVHEDHGIGRYLGLKTMSVGGREGDFLLLEYADGGQLYLPVERLDLISKYLGGDAGAARLDRLGGASWQRVKESVRAALRDMAEELLKLYARRAVAEGHGFSPDAPWQREFEAAFRFEETPDQLRAIEDAKRDMEAERPMDRLVAGDVGYGKTEVALRAAFKAVADGTQVAVLVPTTVLAQQHFGTFSERFAPFPARVELLSRFRAPAEQKTVIEGLRTGAVDVVIGTHRLLSKDVTFKNLGLLIIDEEHRFGVAHKERLKQFRASVDVLALTATPIPRTLYMSLSGVRDMSVIETPPLDRLPVETMIRRFSKAVIKEALERELARGGQVFFVHNRVQSLPSMTRLLQELVPDARIAMAHGQMRERELEAAMVKFVSGQADVLVSTAIVESGLDIPASNTIVVNRADRFGLAQLYQLRGRVGRERQQAYCYLLVPADGRVDEQAQRRLRALQELTELGSGFKLALRDLEIRGAGNLLGAQQHGHIAAVGFDLYSKLLTEAVRELRGEPAATTVEPVVSVDVEGFLPEDYVPEVNQRLALYKRLAGAQADAEVADLRAELSDRFGSLPQPAQQLLDIVRIRVAARALGIERIEAGEGRALVTFSPATPIEPQRLVGAIQRSRGRLLMKREFTLEATIDRGEWPVVRDSLLRLLSELARP*