ggKbase home page

13_1_20cm_2_scaffold_164218_2

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(1445..1669)

Top 3 Functional Annotations

Value Algorithm Source
DNA ligase D; K01971 DNA ligase (ATP) [EC:6.5.1.1] Tax=GWA2_Rokubacteria_73_35_curated UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 56.0
  • Bit_score: 88
  • Evalue 4.80e-15
ATP-dependent DNA ligase n=1 Tax=Rhodococcus imtechensis RKJ300 = JCM 13270 RepID=I0WQS9_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 67.9
  • Coverage: 53.0
  • Bit_score: 75
  • Evalue 3.00e-11
DNA ligase D similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 61.0
  • Bit_score: 77
  • Evalue 2.20e-12

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 225
GTGCCTAGCCGCGGCCTCGACGAGTACCGGCAGAAGCGTGATCCCGCGCGCACGCCCGAGCCGTTCGGTGACCGCCGACCGGCCGAGGGCCACCTGTTCGTCGTCCACAAACACTCGGCGCGGCGGCTCCACTACGACCTGCGGCTCGAGATCGACGGCGTGCTCGCGCACGCGGTCGACAACCTGTCCGCGGCGCTCACGGTGCTTGTGGTGCTGCGTGCCTAG
PROTEIN sequence
Length: 75
VPSRGLDEYRQKRDPARTPEPFGDRRPAEGHLFVVHKHSARRLHYDLRLEIDGVLAHAVDNLSAALTVLVVLRA*