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13_1_20cm_2_scaffold_168098_1

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 1..321

Top 3 Functional Annotations

Value Algorithm Source
msbA; lipid A export ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 104.0
  • Bit_score: 165
  • Evalue 5.80e-38
Lipid A ABC exporter, fused ATPase and inner membrane subunits MsbA n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HU38_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 72.1
  • Coverage: 104.0
  • Bit_score: 154
  • Evalue 5.50e-35
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 106.0
  • Bit_score: 158
  • Evalue 1.10e-36

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 321
CGGGGGACCAGGCTCTCAGGCGGGGAGCGCCAGCGCATCGCCATCGCGCGGGCGCTGCTGCGTGACCCGCCGATCCTCATCCTCGACGAGGCGACGAGCGCGCTCGACACGGAATCGGAGCGCTTGGTCCAGGAGGCGATCGACCGCCTGATGGCGCACCGCACCGTGCTGGTGATCGCGCACCGGCTCACCACCGTGCGGCACGCCGACCTGATCGTCGTGCTGTCCGAAGGGCGGATCGTGGAGCGCGGCACGCACGACACGCTGTTCGCCGCGGGCGGCCTGTACCGGCGCTTCTACGACCTGCAGTTCCGCGTGTAA
PROTEIN sequence
Length: 107
RGTRLSGGERQRIAIARALLRDPPILILDEATSALDTESERLVQEAIDRLMAHRTVLVIAHRLTTVRHADLIVVLSEGRIVERGTHDTLFAAGGLYRRFYDLQFRV*