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13_1_20cm_2_scaffold_2254_8

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 6700..8445

Top 3 Functional Annotations

Value Algorithm Source
phospholipid-lipopolysaccharide ABC transporter; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=GWA2_Rokubacteria_73_35_curated UNIPROT
DB: UniProtKB
  • Identity: 75.9
  • Coverage: 580.0
  • Bit_score: 857
  • Evalue 7.90e-246
Lipid A export ATP-binding/permease protein MsbA n=1 Tax=Syntrophus aciditrophicus (strain SB) RepID=MSBA_SYNAS similarity UNIREF
DB: UNIREF100
  • Identity: 48.8
  • Coverage: 570.0
  • Bit_score: 541
  • Evalue 1.10e-150
phospholipid-lipopolysaccharide ABC transporter similarity KEGG
DB: KEGG
  • Identity: 48.8
  • Coverage: 570.0
  • Bit_score: 541
  • Evalue 3.30e-151

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1746
GTGACGCTGCCCCTCGGCCCCTACCGCCGCCTCTTCGTCTACCTTCGCCCGCACGTCCCGGTCCTGGTCCTCGGGGCCTGCCTGGCGCTCATCGTCTCGGGCATGGAGGGTCTCACCGCGTGGCTCGTGAAGCCGGTGATGGACGACATCTTCATCCGGCGCGACGGCCTCATGCTGAAGCTGATCCCGCTGGCGCTCCTGGCCGTGTACGTCGTGAAGGGGGTCGCGCGTTACCTCCAGTCGTACCTGATGGCCGCCGTCGGCGAGCGGGTCGTGGCCCGCCTGCGGCGCGAGCTCTACACGCACATCCAGTCCATGCCGCTCTCATTCTTTTCGGACGTCCACTCGGCGGATCTCATGTCTCGCATCCTCACCGACGTGACCCGGCTCGCGCGGCTCTCCTCCGGCGTCCTCGTCATGGGCGTGCGCCAGCTCGGCACGATCGCCGCCCTCCTCGTCGTCATGCTCGCCCGCGAGTGGGCGCTCACGCTGACCGCGCTCGTCGCGTTCCCCGCCATCGCGCTCATCGTGCGCACGATCGGCCGGCGGTTGTACACGATCAACAAGCGGACCCAGGAGCGCGTGGCCCAGCTCGCCGTGCTCCTGCACGAGTCGTTCAGCGGCACCAAGATCGTCAAGGCGTTCGGGCGCGAGCGCCACGAGCAGGCGCGGTTCGACGCGCTCAACGACCGGCTCCTCAACCTCTCGCTCAAGAACGTGCGCGCTGACGAGATCACCGAGCCGCTGATGGAGATCGCCGGAGCGCTCGGCATCATGGCGGTCCTCTGGTACGGCGGCTATCGCGTCATCGAGGGGCACATGACGCCGGGTACGCTGTTCTCGTTCACGGCGGCCGCCCTCATGCTCTACGGACCGGTGCGCCGCCTCTCGCGATCCCTGAACGTCGTCCAACAGTCGACCGCGTCGGTCGAGCGCGTCTTCCACATCCTGGAGCTGCCGCCCGCGATCACCGACCGCCCGGGCGCCACGCGGCTCGAGACGTTCACGCGGGCGCTCGCCTTCGAGCGGGTGGACTTCCGCTACGGCGACGCCGACGAGATGACGCTCAAGGAGATCTCGCTCGAGATCCGAAAGGGCGAGGTCGTCGCCTTCGTCGGCATGTCGGGCGCGGGCAAGTCCACCCTCATGGACCTCGTGCCCCGCTTCCACGACGTGACCGCTGGGCGGATCACGCTCGACGGCCGCGACCTGCGCGACGTCACACAGGCCTCGCTCCGCGCCCAGCTCGGCGTCGTGACGCAGGAGACCTTCCTCTTCAGCGACACGATCCGCTACAACATCGCCTACGGGAGGCCCGACGCCACGTTCGAGGAGATCGTGCGTGCGGCGCGCCAGGCCCACGCCCACGACTTCACCCTGGCGTGCCCCGACGGTTACGACACGCTCGTCGGCGAGCGGGGCGTGCGCCTCTCCGGCGGCCAGCGCCAGCGGATCGCGATCGCCCGCGCGTTCCTCAAGAACCCGCCGATCCTGATCCTCGACGAGGCGACCTCGGACCTCGACGCGGAGAGCGAGTTCATGGTCCAGCAGGCGCTGGCCGAGCTCATGCGCGGTCGGACCGTGCTCGTGATCGCGCACCGGCTGGCGACCGTGAGGAACGCCGACCGGATCGTCGTCGTCCACGACGGGCGCATCGCGGAGATCGGTCGCCACGAGGAGCTGATCGCGCTCGACGGCATCTACCGCCGGCTCTACGCGCTCCAGATGGAAGGCGTCACAGGCTAG
PROTEIN sequence
Length: 582
VTLPLGPYRRLFVYLRPHVPVLVLGACLALIVSGMEGLTAWLVKPVMDDIFIRRDGLMLKLIPLALLAVYVVKGVARYLQSYLMAAVGERVVARLRRELYTHIQSMPLSFFSDVHSADLMSRILTDVTRLARLSSGVLVMGVRQLGTIAALLVVMLAREWALTLTALVAFPAIALIVRTIGRRLYTINKRTQERVAQLAVLLHESFSGTKIVKAFGRERHEQARFDALNDRLLNLSLKNVRADEITEPLMEIAGALGIMAVLWYGGYRVIEGHMTPGTLFSFTAAALMLYGPVRRLSRSLNVVQQSTASVERVFHILELPPAITDRPGATRLETFTRALAFERVDFRYGDADEMTLKEISLEIRKGEVVAFVGMSGAGKSTLMDLVPRFHDVTAGRITLDGRDLRDVTQASLRAQLGVVTQETFLFSDTIRYNIAYGRPDATFEEIVRAARQAHAHDFTLACPDGYDTLVGERGVRLSGGQRQRIAIARAFLKNPPILILDEATSDLDAESEFMVQQALAELMRGRTVLVIAHRLATVRNADRIVVVHDGRIAEIGRHEELIALDGIYRRLYALQMEGVTG*