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13_1_20cm_2_scaffold_5556_15

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: 12991..13635

Top 3 Functional Annotations

Value Algorithm Source
pseudouridine synthase; K06178 23S rRNA pseudouridine2605 synthase [EC:5.4.99.22] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated UNIPROT
DB: UniProtKB
  • Identity: 77.2
  • Coverage: 206.0
  • Bit_score: 313
  • Evalue 2.70e-82
Pseudouridine synthase n=1 Tax=Ammonifex degensii (strain DSM 10501 / KC4) RepID=C9R7X1_AMMDK similarity UNIREF
DB: UNIREF100
  • Identity: 51.9
  • Coverage: 206.0
  • Bit_score: 202
  • Evalue 4.70e-49
pseudouridine synthase similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 205.0
  • Bit_score: 202
  • Evalue 1.30e-49

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 645
GTGGTCACGCGGAACCTCGCCACCCTCGCCGATCCCGACGCCGACCGGATCACCGTCGACGGTCGGCCGTTGCCGCCGCCCGAGGCGAGACACTACCTCCTCCTCAACAAGCCTCGCGGCTACGTCACCACGCTCTCCGACCCCCAGGGCCGTCCCGTCGTCGCGGACCTCGTCGACGTCGGCGCGCGCCTCTACCCGGTCGGGCGGCTCGACTGGGACGTCGAGGGCGCACTCCTTCTCACCAACGACGGAGCCTTGACCCACCGGCTCCTCCACCCGCGCTACGGGCTCCCGCGCGTGTACGAGGCGGAGGTGGAGGGCCGCGTGGCGCCGGGGGCGCTCGCGCGCTGGCGTCGCGGCGCCGTGCTCGACGACGGGCCGGCGACGCCCGTCGCGGTCGAGCTCGTTCGCGCGCGCGCCGACGCGAGTCGTCTCCGGCTGACCTTCACCGAGGGGCGCAAGCACGAGGTCAAGCGCTACTGCCAGGCTCTCGGCCATCCCGTCGTGCGGCTCCGGCGGGTCGCCTTCGGCCCGGTGGCGCTCGGCGCCCTCGCGCCCGGCGCCCTTCGCCGGCTCACCCCGCGTGAGCTCGCCGCGCTGCGGGCGGCGGTCGCCGATCGCGCCGGCGGGCGGCGCGAGAGGTGA
PROTEIN sequence
Length: 215
VVTRNLATLADPDADRITVDGRPLPPPEARHYLLLNKPRGYVTTLSDPQGRPVVADLVDVGARLYPVGRLDWDVEGALLLTNDGALTHRLLHPRYGLPRVYEAEVEGRVAPGALARWRRGAVLDDGPATPVAVELVRARADASRLRLTFTEGRKHEVKRYCQALGHPVVRLRRVAFGPVALGALAPGALRRLTPRELAALRAAVADRAGGRRER*