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13_1_20cm_2_scaffold_98058_1

Organism: 13_1_20CM_2_Rokubacteria_69_58

near complete RP 46 / 55 MC: 1 BSCG 46 / 51 MC: 3 ASCG 11 / 38 MC: 1
Location: comp(1..1227)

Top 3 Functional Annotations

Value Algorithm Source
msbA; lipid A export ATP-binding/permease protein; K11085 ATP-binding cassette, subfamily B, bacterial MsbA [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Gemmatimonadetes_71_11_curated UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 426.0
  • Bit_score: 389
  • Evalue 4.30e-105
ABC transporter transmembrane region similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 422.0
  • Bit_score: 295
  • Evalue 1.70e-77
ABC transporter, ATP-binding protein, MsbA family alias=gwe2_scaffold_243_59 id=1909124 tax=TA06 species=Melioribacter roseus P3M genus=Melioribacter taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteria similarity UNIREF
DB: UNIREF100
  • Identity: 34.6
  • Coverage: 445.0
  • Bit_score: 262
  • Evalue 7.20e-67

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Taxonomy

R_Gemmatimonadetes_71_11 → Gemmatimonadetes → Bacteria

Sequences

DNA sequence
Length: 1227
ATGCGCCGCGGCGCCCGCTTGCTGCTGCTGCTGCGCCCCTACACGCTGCTGTTCGTCACCAACATCGTGGCGACGCTGGTGGCGTCCGTGATGGACGGGGCCACCTTCGTGCTGCTCATCCCCTTCCTGCGCGCGCTGTTCGGCCAGCAGGCGCTCCCCGCGACCGGCACCTCGGGCGTGGAGGATGTGCTCGCGAAGATCGCCGGGCCCTTCCTCGCAGCGGCGCTGGTGCTGAAGAACGTGGCGCAGTACGCCGCCGCGGTCTCGAGCGTCGCGATCGAAGAGGGCGTGGTGCGCGACCTGCGGGTGCGCCTGTTCCGCCATCTCCAGACCCTGCCCCTCGGCTTCTTCCAGCGCACCAAGGGCGGCCAGCTGCTCGCCCGGGTGGTGAGCGACGCCGATCAGGTGAAGACGGCCGTCACCGCCGCGCTCGCCTCGCTGCTCCGCAACGTCAGCCTCATCGTCGTGTACGTCGCGATCTTGCTGGGGCTGTCGTGGCGGCTCACGCTGATCGCGATCGTCGCGGCCCCGGTGCTGGCGCTCATCATCCGGCCGATGATCGCCCGCGTGCGCCGCCGCTCGCGCGAGCAGGCGGACGAGCGCGGCGAGCTGACGAGCCTGGTGGCGGAGATGGTGGCGTCGATCAAGCTGGTGCGCGCCTACGTGGCGGAGGCGTTCGAGGCGGAGCGCTTCCAGCGGCTCGCCGACCGCTACCGCCGGCGGGTGCTGCGCGCGCAGGGCTGGTCCACCCTCACGAGCCCCGTGAGCGAGATCTTCGCCGGGCTCGTGGTCGCGCTGATCCTCTTCTACGGCACCCACCTCGCCCTCGGCGCCTCGGCCACGCTCCGGCCCGAGGTGTTCATCGCGTTCATCTTCTTGGCGCTGCGCCTCATGTCGCCGGTGAAGGCGGTCGCGCAGTACCCCACGATCATGGCGGGCGCGGTGGCCGCGGCCGACCGCGTCTTCGAGGTGCTCGACCTCCCGCCCGACGAAGGCGATCGGCCCGGCGAGATCCCCGCGGCCTTCCGGGAGCGGATCGAGTACCGCCGGGTGAGCTTCTCCTACGACGGCACCGAGGCCGCCGTGCTGCGCGACGTGGACCTGGAGGTGCGGCGGGGCCAGGTGGTCGCGATCGTGGGGCCGTCCGGGGCGGGAAAGACGACGCTCGTGGACCTGCTGCCGCGCTTCTACGAGCCCACGAGCGGCGGCATCCTCATCGACGGCGTG
PROTEIN sequence
Length: 409
MRRGARLLLLLRPYTLLFVTNIVATLVASVMDGATFVLLIPFLRALFGQQALPATGTSGVEDVLAKIAGPFLAAALVLKNVAQYAAAVSSVAIEEGVVRDLRVRLFRHLQTLPLGFFQRTKGGQLLARVVSDADQVKTAVTAALASLLRNVSLIVVYVAILLGLSWRLTLIAIVAAPVLALIIRPMIARVRRRSREQADERGELTSLVAEMVASIKLVRAYVAEAFEAERFQRLADRYRRRVLRAQGWSTLTSPVSEIFAGLVVALILFYGTHLALGASATLRPEVFIAFIFLALRLMSPVKAVAQYPTIMAGAVAAADRVFEVLDLPPDEGDRPGEIPAAFRERIEYRRVSFSYDGTEAAVLRDVDLEVRRGQVVAIVGPSGAGKTTLVDLLPRFYEPTSGGILIDGV