ggKbase home page

13_1_40cm_2_scaffold_19

Search features with annotation key words

Displaying items 31-60 of 75 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_2_scaffold_19_28
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27183..28055
DNA (873bp) protein (291aa)
Transcriptional regulator/sugar kinase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5CYL2_PELTS
NagC; transcriptional regulator/sugar kinase
Transcriptional regulator/sugar kinase {ECO:0000313|EMBL:BAF60915.1}; TaxID=370438 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Pelotomaculum.;" source="Pelotomaculum ther
13_1_40cm_2_scaffold_19_29
Tannerella sp. oral taxon BU063, Tannerella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28185..29567
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:831 RepID=R5I568_9BACT
tRNA nucleotidyltransferase {ECO:0000313|EMBL:ETK00590.1}; TaxID=1411148 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Tannerella.;" source="Tannerella sp. oral tax
polyA polymerase family protein
13_1_40cm_2_scaffold_19_30
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29653..30168
DNA (516bp) protein (172aa)
Putative uncharacterized protein n=1 Tax=Desulfitobacterium hafniense (strain Y51) RepID=Q24SD5_DESHY
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAE85057.1}; TaxID=138119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium
13_1_40cm_2_scaffold_19_31
CSP1_5_NC10, NC10, Bacteria

Not on your lists

30665..31666
DNA (1002bp) protein (334aa)
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11) id=14430977 bin=bin3_NC10 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin3_NC10 organism_group=NC10 rbh
glpX; fructose 1,6-bisphosphatase II (EC:3.1.3.11) Tax=CSP1_5_NC10
fructose 1,6-bisphosphatase II
13_1_40cm_2_scaffold_19_32
unknown

Not on your lists

31828..32451
DNA (624bp) protein (208aa)

This feature has no annotations

13_1_40cm_2_scaffold_19_33
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(32456..33985)
DNA (1530bp) protein (510aa)
AMP-dependent synthetase and ligase n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C738_SPHTD
AMP-dependent synthetase and ligase
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ACZ37799.1}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobac
13_1_40cm_2_scaffold_19_34
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(34380..35651)
DNA (1272bp) protein (424aa)
Major facilitator superfamily MFS_1 Tax=RBG_16_Chloroflexi_63_12_curated
major facilitator superfamily protein id=24458890 bin=RBG_19FT_COMBO_GAL15_69_19 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=RBG_19FT_COMBO_GAL15_69_19 organism_group=GAL15 organism_desc=Curation Candidate
major facilitator superfamily protein
13_1_40cm_2_scaffold_19_35
unknown

Not on your lists

35719..36129
DNA (411bp) protein (137aa)

This feature has no annotations

13_1_40cm_2_scaffold_19_36

Not on your lists


36144..36584
DNA (441bp) protein (147aa)
50S ribosomal protein L9 n=1 Tax=Acidobacteriaceae bacterium TAA166 RepID=UPI0003B51FA2
Ribosomal protein L9 {ECO:0000313|EMBL:CBH76051.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
50S ribosomal protein L9
13_1_40cm_2_scaffold_19_37
unknown

Not on your lists

comp(38580..38807)
DNA (228bp) protein (76aa)

This feature has no annotations

13_1_40cm_2_scaffold_19_38
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

40405..41694
DNA (1290bp) protein (430aa)
Adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4DCJ0_DESAJ
13_1_40cm_2_scaffold_19_39
RBG_16_Euryarchaeota_68_13_curated, Euryarchaeota, Archaea

Not on your lists

41700..42836
DNA (1137bp) protein (379aa)
Uncharacterized protein n=1 Tax=Conexibacter woesei (strain DSM 14684 / JCM 11494 / NBRC 100937 / ID131577) RepID=D3F4Z7_CONWI
hypothetical protein Tax=RBG_16_Euryarchaeota_68_13_curated
hypothetical protein
13_1_40cm_2_scaffold_19_40
unknown

Not on your lists

comp(42841..43836)
DNA (996bp) protein (332aa)

This feature has no annotations

13_1_40cm_2_scaffold_19_41
Caldilinea aerophila, Caldilinea, Caldilineales, Caldilineae, Chloroflexi, Bacteria

Not on your lists

43839..45185
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Caldilinea aerophila (strain DSM 14535 / JCM 11387 / NBRC 104270 / STL-6-O1) RepID=I0I0N5_CALAS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAL98822.1}; TaxID=926550 species="Bacteria; Chloroflexi; Caldilineae; Caldilineales; Caldilineaceae; Caldilinea.;" source="Caldilinea aerophila (strain DSM 1
13_1_40cm_2_scaffold_19_42
Lutibaculum baratangense, Lutibaculum, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

45198..45674
DNA (477bp) protein (159aa)
Endoribonuclease L-PSP n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RK03_9RHIZ
Endoribonuclease L-PSP {ECO:0000313|EMBL:ESR23585.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AM
Endoribonuclease L-PSP
13_1_40cm_2_scaffold_19_43
RBG_13_OP11_40_15_curated, Microgenomates, Bacteria

Not on your lists

45658..46572
DNA (915bp) protein (305aa)
Phosphoesterase PA-phosphatase related protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EFA6_9CHLR
hypothetical protein Tax=RBG_13_OP11_40_15_curated
hypothetical protein
13_1_40cm_2_scaffold_19_44
RBG_16_Chloroflexi_68_14_curated, Chloroflexi, Bacteria

Not on your lists

comp(46547..47821)
DNA (1275bp) protein (425aa)
Putative gluconeogenesis factor n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8N4J4_ANATU
hypothetical protein Tax=RBG_16_Chloroflexi_68_14_curated
hypothetical protein
13_1_40cm_2_scaffold_19_45
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

47915..48265
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C1M0_SPHTD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
hypothetical protein
13_1_40cm_2_scaffold_19_trna_3
unknown

Not on your lists

48402..48480
DNA (79bp)
transferRNA
13_1_40cm_2_scaffold_19_46
unknown

Not on your lists

48590..48793
DNA (204bp) protein (68aa)

This feature has no annotations

13_1_40cm_2_scaffold_19_47
unknown

Not on your lists

48938..49384
DNA (447bp) protein (149aa)

This feature has no annotations

13_1_40cm_2_scaffold_19_48
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

50005..50646
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Amycolatopsis balhimycina RepID=UPI000368ED8F
LuxR family two component transcriptional regulator
LuxR family two component transcriptional regulator {ECO:0000313|EMBL:AGZ41533.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actin
13_1_40cm_2_scaffold_19_49

Not on your lists

51239..51679
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Marinithermus hydrothermalis (strain DSM 14884 / JCM 11576 / T1) RepID=F2NKJ1_MARHT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKK82902.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
13_1_40cm_2_scaffold_19_50
Rubrobacter xylanophilus, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

Not on your lists

comp(51795..52382)
DNA (588bp) protein (196aa)
Transcriptional regulator, TetR family n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AR83_RUBXD
TetR family transcriptional regulator
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ABG06095.1}; TaxID=266117 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacteraceae; Rubrobacter.;"
13_1_40cm_2_scaffold_19_51
R_NC10_66_22, NC10, Bacteria

Not on your lists

52461..52718
DNA (258bp) protein (86aa)
Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
13_1_40cm_2_scaffold_19_52
R_NC10_66_22, NC10, Bacteria

Not on your lists

52740..53039
DNA (300bp) protein (100aa)
Peroxidase-like protein n=1 Tax=Nitratireductor indicus C115 RepID=K2MZ61_9RHIZ
peroxidase-like protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
alkylhydroperoxidase
13_1_40cm_2_scaffold_19_53
RBG_19FT_COMBO_Chloroflexi_56_12_curated, Chloroflexi, Bacteria

Not on your lists

53049..53657
DNA (609bp) protein (203aa)
methyltransferase type 12 Tax=RBG_19FT_COMBO_Chloroflexi_56_12_curated
Putative methyltransferase id=2876946 bin=GWC2_Chloroflexi_73_18 species=Streptomyces sp. TA-0256 genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
methyltransferase type 12
13_1_40cm_2_scaffold_19_54
Microlunatus phosphovorus, Microlunatus, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

53816..54040
DNA (225bp) protein (75aa)
Putative ArsR family transcriptional regulator n=1 Tax=Microlunatus phosphovorus (strain ATCC 700054 / DSM 10555 / JCM 9379 / NBRC 101784 / NCIMB 13414 / VKM Ac-1990 / NM-1) RepID=F5XTU5_MICPN
ArsR family transcriptional regulator
Putative ArsR family transcriptional regulator {ECO:0000313|EMBL:BAK37544.1}; TaxID=1032480 species="Bacteria; Actinobacteria; Propionibacteriales; Propionibacteriaceae; Microlunatus.;" source="Microl
13_1_40cm_2_scaffold_19_55
Brevibacterium casei, Brevibacterium, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54033..54482
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Brevibacterium casei S18 RepID=K9AG48_9MICO
Uncharacterized protein {ECO:0000313|EMBL:EKU46273.1}; TaxID=1229781 species="Bacteria; Actinobacteria; Micrococcales; Brevibacteriaceae; Brevibacterium.;" source="Brevibacterium casei S18.;"
hypothetical protein
13_1_40cm_2_scaffold_19_56
Arthrobacter sp. SPG23, Arthrobacter, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

54494..54850
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Curtobacterium ginsengisoli RepID=UPI0003B45A5D
SPG23_c18, whole genome shotgun sequence {ECO:0000313|EMBL:KIS27107.1}; TaxID=1610703 species="Bacteria; Actinobacteria; Micrococcales; Micrococcaceae; Arthrobacter.;" source="Arthrobacter sp. SPG23.;
hypothetical protein
Displaying items 31-60 of 75 in total

View Taxonomy