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13_1_40cm_2_scaffold_1012_1

Organism: 13_1_40CM_2_Actinobacteria_65_8

partial RP 18 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 6 / 38
Location: comp(1..516)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043744}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080, ECO:0000256|SAAS:SAAS00043720};; tRNA pseudouridine(55) s similarity UNIPROT
DB: UniProtKB
  • Identity: 53.3
  • Coverage: 152.0
  • Bit_score: 143
  • Evalue 2.20e-31
tRNA pseudouridine synthase B n=1 Tax=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) RepID=D1CFW9_THET1 similarity UNIREF
DB: UNIREF100
  • Identity: 47.6
  • Coverage: 164.0
  • Bit_score: 142
  • Evalue 3.60e-31
tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 53.3
  • Coverage: 152.0
  • Bit_score: 143
  • Evalue 4.50e-32

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Taxonomy

Thermocrinis ruber → Thermocrinis → Aquificales → Aquificae → Aquificae → Bacteria

Sequences

DNA sequence
Length: 516
GTGCCGCCTCATCGAAACGCTGAGGGGGTCCCGTTTCCGACCGGCGTCCTCAACGTTGACAAGGCCGCGGGTGAGACCTCGTTTCAGGTGGTGCGTAAGCTGCGTCACCTGACCGGGGCGCACCGCGTGGGGCATGCCGGCACGCTCGACCCGCTGGCGACCGGAGTGCTGCCAATCCTCTTCGAATCCGCAACTCGCCTCGCCGAGTTCGCCCACCGGCTGCCCAAGACATATGTCGCGGACATCCACCTGGGCTTCGTGACGGCGACCGATGACGCTGAGGCGGAGCCGCAGCCGCAAGGCGACCCCAGCGCGCTGACCGCGGAGGACATCGCCGGCGCGCTGGCGCATTTCACCGGCCGCATCCTCCAGGAACCCCCTGCGTTCTCAGCGGTCAAGGTCGACGGCAAGCGCGCATACCGACTCGCAAGGCAGGGTGAAGTCCCCAAGCCGCCGGCGCGCGAGGTCGAGGTGTACGGCGCCCGCCTGCTCGACTTCGTCTCTGGGGCCTCGGCG
PROTEIN sequence
Length: 172
VPPHRNAEGVPFPTGVLNVDKAAGETSFQVVRKLRHLTGAHRVGHAGTLDPLATGVLPILFESATRLAEFAHRLPKTYVADIHLGFVTATDDAEAEPQPQGDPSALTAEDIAGALAHFTGRILQEPPAFSAVKVDGKRAYRLARQGEVPKPPAREVEVYGARLLDFVSGASA