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13_1_40cm_2_scaffold_358_3

Organism: 13_1_40CM_2_Actinobacteria_65_8

partial RP 18 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 6 / 38
Location: comp(1659..2201)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Frankia sp. CN3 RepID=G6HE94_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 33.3
  • Coverage: 171.0
  • Bit_score: 85
  • Evalue 5.40e-14
Marine sediment metagenome DNA, contig: S01H1_L04602 {ECO:0000313|EMBL:GAF68614.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen similarity UNIPROT
DB: UniProtKB
  • Identity: 33.5
  • Coverage: 164.0
  • Bit_score: 87
  • Evalue 2.60e-14
ECF subfamily RNA polymerase sigma-24 subunit similarity KEGG
DB: KEGG
  • Identity: 33.9
  • Coverage: 183.0
  • Bit_score: 82
  • Evalue 9.90e-14

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Taxonomy

marine sediment metagenome

Sequences

DNA sequence
Length: 543
GTGGGGTCGGCATGGAAAACCGACGTTGCGATGAACGACGACCGAGCCCTGTTCGAACAGATGGTGCGAAGCCTGGGGCGTCCCGCCATGAAGTTCGCCAATGTGCTCGTCCATGACACCGAGCTTGCGGAGGAGATCGTGCAAGAGGCCTTTGCGAGGTGCTGGGCGTCGCCAAACACGCCATCGCCTGAGGTCGAGTTCCGCCGCTACCTCTATCGAGTCATCACAAATCTGGCGCATGACTACTACCGCAGTCAATCGCGTCGCGTCGCGATGCAAGGCCCGGCCCAAGCCGCAAGCAATCCAGTTGAAATCGTGGAACGACGGGCGGGCGATGAGGCCATGAGGCGCGCGATCCGCGGCCTTGGCGTTCGCGAACGGCAGGCCGTTTACCTGCGCTACTTCGAGGATCTGTCATTCGCGGAAGCGGCGCGGATCATGGGCGCACGTCAGGGTACTGTGCGAGTCCTGGTCTTTCGGGCGCTCGGAAAATTGCGGCGCGAGCTGACATCGAGCCGCGGATCGGACCAGGTGGCGATCTGA
PROTEIN sequence
Length: 181
VGSAWKTDVAMNDDRALFEQMVRSLGRPAMKFANVLVHDTELAEEIVQEAFARCWASPNTPSPEVEFRRYLYRVITNLAHDYYRSQSRRVAMQGPAQAASNPVEIVERRAGDEAMRRAIRGLGVRERQAVYLRYFEDLSFAEAARIMGARQGTVRVLVFRALGKLRRELTSSRGSDQVAI*