ggKbase home page

13_1_40cm_2_scaffold_381_13

Organism: 13_1_40CM_2_Actinobacteria_65_8

partial RP 18 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 6 / 38
Location: comp(14044..15006)

Top 3 Functional Annotations

Value Algorithm Source
PDZ/DHR/GLGF domain protein n=1 Tax=Frankia sp. CN3 RepID=G6HHZ1_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 59.0
  • Coverage: 317.0
  • Bit_score: 336
  • Evalue 2.40e-89
peptidase S1 and S6, chymotrypsin/Hap similarity KEGG
DB: KEGG
  • Identity: 59.1
  • Coverage: 323.0
  • Bit_score: 334
  • Evalue 3.40e-89
Trypsin serine protease {ECO:0000313|EMBL:ETA03917.1}; TaxID=1352929 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CcI6.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.1
  • Coverage: 323.0
  • Bit_score: 334
  • Evalue 1.30e-88

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Frankia sp. CcI6 → Frankia → Frankiales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGACACAAGATGCCCCGGCAGCGGCCACCGAGCGTGACGTTCTCGACTCCTACTCGGCGACAGTGACCACTGTCGCGCAGCGCGTCCTACCCTCTGTCGCGAGCCTTCGGGTGCGCAGGGGCAGCCGGTCTTTCGAAGGCGGCGCAGGTTCGGGGGTCGTCATCACGCCAGATGGCTTCCTGGTCACCTCCGCACACGTTGTCGCACAAGCCGGCGCGGCCAGCGCGTCATTCATCGACGGTTCCGAGTACGAGCTCGACGTCGTCGGGGCCGACGCGCTTTCCGACCTGGCGATTGCGCGAGCGCGCGCAGCCACCCTGGAGCCGATCCAGATCGGCAACGCGGACAACCTGCGCGTGGGCCAGCTCGTCGTCGCGATCGGAAATCCAATGGGCTTCTCAGGATCGGTGACGTCCGGGGTCGTCAGCGGGTTAGGCCGCTCGCTGGCGACCGCAGACGGCAACGGGAATCGCCGCTTCATCGAGGACGTAATACAGACGGACGCCGCCCTCAACCCGGGCAACTCAGGCGGCGCGCTCGCCGACTGGCAGGCGCGACTGGTCGGCGTCAACACGGCGGTGGCGGGGATGGGGCTCGGTCTGGCGGTTCCGATCAACAAGACCACTCAGGCGATTCTTTCCGCCCTGATGAGAAACGGACGCGTCCGCCGAGCGTTCCTCGGCATCGCCGGCGGCACCAGGCCACTGGCGCCCGCGACCGCGCAGCGCCTCGGCCGGAAGGCGGGCGTAGAAGTTCAGGAGGTCGTGACTGGGAGTCCGGCCGCGGCGGCTTCCCTGCGCGGGGGCGATGTGATCGTTTCGGTCGGCGATGTCGCGGTCGCCAAGGCGGGCGACCTCCAGCGCCTCATGGTGGAGGCGCAGATCGGGGCCAAGCTTGCTTTGACGGTGTTGCGTAGCGACAAGCTCGTGACCGTGGACGTCGTTCCGGTGGAGCTCGCCTAG
PROTEIN sequence
Length: 321
MTQDAPAAATERDVLDSYSATVTTVAQRVLPSVASLRVRRGSRSFEGGAGSGVVITPDGFLVTSAHVVAQAGAASASFIDGSEYELDVVGADALSDLAIARARAATLEPIQIGNADNLRVGQLVVAIGNPMGFSGSVTSGVVSGLGRSLATADGNGNRRFIEDVIQTDAALNPGNSGGALADWQARLVGVNTAVAGMGLGLAVPINKTTQAILSALMRNGRVRRAFLGIAGGTRPLAPATAQRLGRKAGVEVQEVVTGSPAAAASLRGGDVIVSVGDVAVAKAGDLQRLMVEAQIGAKLALTVLRSDKLVTVDVVPVELA*