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13_1_40cm_2_scaffold_52_34

Organism: 13_1_40CM_2_Actinobacteria_65_8

partial RP 18 / 55 MC: 2 BSCG 21 / 51 MC: 1 ASCG 6 / 38
Location: 33300..36821

Top 3 Functional Annotations

Value Algorithm Source
transcription-repair coupling factor; K03723 transcription-repair coupling factor (superfamily II helicase) [EC:3.6.4.-] Tax=RBG_16_Chloroflexi_64_32_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 43.8
  • Coverage: 999.99
  • Bit_score: 858
  • Evalue 9.30e-246
Transcription-repair-coupling factor n=2 Tax=Chloroflexus RepID=A9WHG9_CHLAA similarity UNIREF
DB: UNIREF100
  • Identity: 41.7
  • Coverage: 999.99
  • Bit_score: 818
  • Evalue 7.60e-234
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 41.7
  • Coverage: 999.99
  • Bit_score: 818
  • Evalue 2.20e-234

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Taxonomy

RBG_16_Chloroflexi_64_32_curated → Chloroflexi → Bacteria

Sequences

DNA sequence
Length: 3522
ATGAGCGCGCTAGGTCAGCAAGCCCTAGACGTGGCGCCCGGGCTGCGCCGGTGGGTGACACAGGGTGAAGGTGAGCTGCGCGTTGCACGCTTGCCCCGACCAGCTTGGCCGATCGTGGCGGGCGCGGTCGCACGTGCCCTGGCGGACGCGGGCCGCTCGGTTCTGATCCTCGCGCCGGCACCGGACCGCTTCTGCGACGACCTGAGGCCCTGGCTCGCAGGCCGGCCTGCGGCATTCGTCTTCGCGGAGGTCGCGGTCTCTTTTCTCGACCGGCCGCCGGCGTTCGACGATTCGGTCGACAAGCGTCTGGAGGCTCTGAACGCGCTCGCGGACCGTACATCACCAAGCGTCGTCGTGTCATCGCGGCGCGCTATCACGCGCGCGACCATCTCGCCCGCTGACCTGGCCCAGGGGACTTTGGTCCTTGCGCCGGGGAGCGGGCCCGACCCCGTCGTCGCGGCCGCTCGGCTCGTCGAGATGGGCTACTCGCGCGAGCTGCTCGTCGAAGAGCATGGTCAGTTCTCGCTGCGCGGCGGAATCCTCGACGTGTTCCCGGCCGCATCCGACTCTCCGGTACGAGCCGAGTGGTCCGGCGACGTCATCGATACGCTCCGCCTGTTCGACTCGGAGAACCAGCGCTCGGTGATGGCGGTGCCACGAGTTGCGATCCACCCTGGTCGCGAGCTGTTGTTTGGCCCGCGCCGGGGAGCGGCAGCCGCCAACCGCCTCCGCCAGGGTGTGTCGCTCGACCGCCTGCGCGCGGACGTCCGGGCGGACTGGGAGGAAGAGCTCGAGCGTCTTGAGGCGGGCGGCGCATTTCCGGGCATCGAGTTTTACTCGGGCTATCTGGATCCGTCGCTGCCATCCCTGCTCGAGCACCTGCCCACGGGCCTCGCGGTCGTCGACATCGAGCCCGGTCGTCAGCTTGCAGATGCGCGAGTGCTCGTCGAAGAGACAGAGATACTCGCCGCCGCCGAAGCCGCTGGCGGGGAGCTTCCGCACCGGTTTGCGCTGCCGATGGTCAGTGCGGAGAGGCTGCAAACGGGCACCGGCCATCCGCGCCTCGAGCTCACGGCTGGAGAGGGGGCCGACGGCGCCATCGACCTCGGGTGGATGGAGGCCGAACCGCTTGTGGGCCGGCCACGGGCTGCAGCCGAGCTGGCCGATCTCGCGGGCTCGATGACGGTGGCCGTCGCCACCGAGCAGACGGAGCGCCTGCGGACTTTCCTCGAAGAGGGCGGCGTTCGCGAGCGACCTCGGGAGATCGAGCTCGACCTCGATCTTCCGCTCGAACCAGGGCTGGTGCAGGCCGACATGGACATCGCGGCCGGATGCGTGCAGCCGGCGATCGGATTCCACCTCGCGACCGATGCCGAGCTCTTCGGGCGGTTGCGCCGGCCGAGCCGGCCTACCCGGTCATCTCGCGCCCGTGCCGACCAGCTGACACGCGAGTTCACGCTGGACTTTGCTCCGGGCGAGCTTGTGGTCCACGTCGACCACGGGATCGCACGCTTCGCTGGCATGCGCCTTCTGGAGTCGGATGGCGCGCATCGCGAGTACCTCGAGCTCGAATACGCCGAGGCGGACAAGCTGTTCGTGCCGGTCGAGAACCTGGACCGCGTCCAGAAGTTTCTTGGCGGCGAGGGCGAGCCGGCGCTGCATCGACTCGGAACCGGCGATTGGTCACGGGCGCGAGGCCGCGCGCGCAAGGTGGTCCAGGACGTGGCCGAGGAGCTGTTGAAGATCTATTCGCTGCGCGAGGCGAGGCCGGGCATCGCATTCGCGCCGGACACCGCCTGGCAGCAGGAGCTCGAGTCGTCCTTTCCTTATGAGGAGACGGCTGACCAGGTGGCGGCGCTCGCCGAGATCAAAGCGGACATGGAGTCCGACCGGCCCATGGACCGGCTGCTCTGCGGCGACGTCGGGTTTGGCAAGACCGAGCTGGCGCTGCGGGCGGCATTCAAAGCGTCGATGAGCGGCAAGCAGGTGGCGCTGCTTGCGCCGACCACGGTCCTGGCGCAGCAGCACTACCACGTCTTCACTCAACGACTCGACAAGTTTCCGGTGACGATCGAGATGCTGTCGCGATTCGTGGACCACGAAACGCAGGCCCGCACACTGGAAGGGCTGAAGGCCGGGCAGGTGGACATCGTGGTCGGCACGCACCGGCTCCTGCAGCGCGACGTGCGCTTCAAGCGTCTCGGCCTCTTGATCGTCGACGAGGAGCACCGCTTCGGCGTCATGCAGAAGGAGCGGTTGAAGAAGCTGCGCACGCAGCTCGATGTGCTGTCGCTTTCAGCGACGCCGATACCACGCACGCTGCACATGGCTGTCGGCGGCATTCGCGACATGAGCGTCATCCAGACTCCGCCCGAGGAGCGGCAGCCGATCAAGACGTATGTTACGGCCGACACGCTAGAGGTCGTTCGCGAGGCGATCATGCGTGAGCTTCAGCGGGGCGGCCAGGTCTACTACGTGCACAATCGCGTGCGCACGATCGAGAAGGCCGCCGATCGGGTCCGCGACCTTGTGCCAAGTGCCCGGGTCATCGTCGGCCACGGGCAGATGCCGGAAGACCAGCTGGCGCGGGTGATGGTCGAGTTTGAATCGGCGAAGCACGACGTGCTGGTGTGCTCCACGATCATCGAGTCCGGATTGGACATTCCGAACGTCAACACGATCATCGTCGAGCGCGCGGACCGGTTTGGGCTCGCACAGCTGTACCAGCTGCGCGGTCGCGTCGGACGTTCAGGCCGGCGCGCGTACGCGTACTTCCTATATGACCCTCGTCGCTCGCTCACAGAAACCGCAGACAAGCGGCTCGACGTCATCTCAGGGCTTCACGAGCTGGGGCAGGGCTTCAAGATCGCCCTCCGAGACCTCGAGATTCGCGGCGCCGGCAACCTGCTCGGCACCGAGCAGCATGGCGCGATCGCGGCGGTCGGCTTCGAGATGTATCTGCAGATGCTGCAGAGCGCGGTGGGCAAGCTGCGCACCGGATCAGATGAAACCGCGGTCGGCGACGTCCTCTCGACCGCTGAGATGAACCTCGACCTGCCGCTCGATCACTTCATCCCACGCTCGTACATACGCGACGAGAAGCTGCGTCTCGGGGCTTACCGGCAGCTCGCCGCGACCGATGAAGAGGAGGAGCTGGAATCCGTTCTCCGCTCGCTCGAAGACCGCTACGGGCCCGGACCCGCCCAGCTTGACAACCTGGCGTACTCGCTGAGGGTCAAGCTGCGCGGGCAGCGGCTGGGCCTTCGGGGTGTCGTCGCCGATGGGCACGACATCGTCATCCGCGTCGACCCCCAGCGCTACCTCGACGTCGACGAGCTGGCGCGCAGGATGGCGGGTCGCATTTCTGTCTTTCCCAACCGCATCAAGATGCGCCGCCAGGGTGCCGGGCGCGCGCAGGGCGCACTTCCAGACAATGCATGGATGGATGATCTTCTCTTTCTGCTGCGCGAGATGGGTGACCTGTACGAGGCGGGCCGCAACGTCGTGGTAACCAGCGCGTGA
PROTEIN sequence
Length: 1174
MSALGQQALDVAPGLRRWVTQGEGELRVARLPRPAWPIVAGAVARALADAGRSVLILAPAPDRFCDDLRPWLAGRPAAFVFAEVAVSFLDRPPAFDDSVDKRLEALNALADRTSPSVVVSSRRAITRATISPADLAQGTLVLAPGSGPDPVVAAARLVEMGYSRELLVEEHGQFSLRGGILDVFPAASDSPVRAEWSGDVIDTLRLFDSENQRSVMAVPRVAIHPGRELLFGPRRGAAAANRLRQGVSLDRLRADVRADWEEELERLEAGGAFPGIEFYSGYLDPSLPSLLEHLPTGLAVVDIEPGRQLADARVLVEETEILAAAEAAGGELPHRFALPMVSAERLQTGTGHPRLELTAGEGADGAIDLGWMEAEPLVGRPRAAAELADLAGSMTVAVATEQTERLRTFLEEGGVRERPREIELDLDLPLEPGLVQADMDIAAGCVQPAIGFHLATDAELFGRLRRPSRPTRSSRARADQLTREFTLDFAPGELVVHVDHGIARFAGMRLLESDGAHREYLELEYAEADKLFVPVENLDRVQKFLGGEGEPALHRLGTGDWSRARGRARKVVQDVAEELLKIYSLREARPGIAFAPDTAWQQELESSFPYEETADQVAALAEIKADMESDRPMDRLLCGDVGFGKTELALRAAFKASMSGKQVALLAPTTVLAQQHYHVFTQRLDKFPVTIEMLSRFVDHETQARTLEGLKAGQVDIVVGTHRLLQRDVRFKRLGLLIVDEEHRFGVMQKERLKKLRTQLDVLSLSATPIPRTLHMAVGGIRDMSVIQTPPEERQPIKTYVTADTLEVVREAIMRELQRGGQVYYVHNRVRTIEKAADRVRDLVPSARVIVGHGQMPEDQLARVMVEFESAKHDVLVCSTIIESGLDIPNVNTIIVERADRFGLAQLYQLRGRVGRSGRRAYAYFLYDPRRSLTETADKRLDVISGLHELGQGFKIALRDLEIRGAGNLLGTEQHGAIAAVGFEMYLQMLQSAVGKLRTGSDETAVGDVLSTAEMNLDLPLDHFIPRSYIRDEKLRLGAYRQLAATDEEEELESVLRSLEDRYGPGPAQLDNLAYSLRVKLRGQRLGLRGVVADGHDIVIRVDPQRYLDVDELARRMAGRISVFPNRIKMRRQGAGRAQGALPDNAWMDDLLFLLREMGDLYEAGRNVVVTSA*