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13_1_40cm_2_scaffold_28389_4

Organism: 13_1_40CM_2_Archaea_52_13

partial RP 19 / 55 MC: 4 BSCG 6 / 51 ASCG 17 / 38 MC: 1
Location: comp(2007..2465)

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L13 n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HJ17_PYRSN similarity UNIREF
DB: UNIREF100
  • Identity: 44.6
  • Coverage: 139.0
  • Bit_score: 130
  • Evalue 1.20e-27
50S ribosomal protein L13P similarity KEGG
DB: KEGG
  • Identity: 44.6
  • Coverage: 139.0
  • Bit_score: 130
  • Evalue 3.50e-28
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366}; TaxID=342949 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Pyrococcus.;" source="Pyrococcus sp. (strain NA similarity UNIPROT
DB: UniProtKB
  • Identity: 44.6
  • Coverage: 139.0
  • Bit_score: 130
  • Evalue 1.70e-27

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Taxonomy

Pyrococcus sp. NA2 → Pyrococcus → Thermococcales → Thermococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 459
GTGAAAAAGACAGTAGCCGTCACGCAAGCCGAAGAAATTGTTGACGCTTCCAATCTCATCCTGGGAAGAATGGCTAGTTACGTTGCCAAGAAGGCTCTTGACGGAAAGAGCATGGTGGTCATAAACGCAGAACGCGCAGTCATTTCGGGAACAAAAGAGCGAGTTGTCGCTAGAGCTAAGCTGAAACTAAAGACTCGAACGCTCGGGAACCTGGAGAAAAGCCCGACCCATCCGCGCAAGCCTGACGGTTACGTCCGAAGAGTCATACGAGGAATGCTACCTTGGAAAAAAGCGGGAGGCAAAGACGCTTTCCATAGAGTCAAAGTCTACATCGGGACCCCTAGCGAATATCTCGATCGTCCAGCGACCAGAGTCGCTGACGCCGACTCGTCAAGACTGAGAGTTCCATACATCACCATCGCCCAATTATCCGGTGAGATTGGAGGCTTCGTAGAGTGA
PROTEIN sequence
Length: 153
VKKTVAVTQAEEIVDASNLILGRMASYVAKKALDGKSMVVINAERAVISGTKERVVARAKLKLKTRTLGNLEKSPTHPRKPDGYVRRVIRGMLPWKKAGGKDAFHRVKVYIGTPSEYLDRPATRVADADSSRLRVPYITIAQLSGEIGGFVE*