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13_1_40cm_2_scaffold_28389_5

Organism: 13_1_40CM_2_Archaea_52_13

partial RP 19 / 55 MC: 4 BSCG 6 / 51 ASCG 17 / 38 MC: 1
Location: comp(2462..3097)

Top 3 Functional Annotations

Value Algorithm Source
rpoD; DNA-directed RNA polymerase subunit D; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=RBG_16_Archaea_50_20_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 55.9
  • Coverage: 188.0
  • Bit_score: 216
  • Evalue 3.30e-53
RNA polymerase insert n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BB81_9ARCH similarity UNIREF
DB: UNIREF100
  • Identity: 45.7
  • Coverage: 210.0
  • Bit_score: 183
  • Evalue 2.20e-43
RNA polymerase insert similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 210.0
  • Bit_score: 183
  • Evalue 6.30e-44

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Taxonomy

RBG_16_Archaea_50_20_curated → Archaea

Sequences

DNA sequence
Length: 636
ATGGACATAAAACTCCTCACCAAGGAACAGGACACTATCCGTTTTGTCCTGTCCGATGTGTCGCCGGCATTCGCCAACGCGGTCCGACGCATAATCCTCGCCGAGGTGCCAGTGATGGCGATTGAAGACGTCATGATTCTCGAGAACAGCTCCGTCATGTACGACGAGATTCTAGCCCACCGTCTCGGGCTCATACCAGTCACAACGGATCAGAGCTACAATCTTCCCGAGGAATGCACATGCAAAAGCGAACTAGGTTGCGAAAAGTGTAGAGCATCGCTCTCGCTAGAAGTCGAAGCCTCAGACCCCGTCGAGGTTGTCTACACATCTAGTCTGAAACCAGAGAACCCTGAAGTGAAACCTGTCTCCGACAAGGTCCCGATCGTCAAGCTTGCCCAAGGCCAGAGAATCAAGCTTGAAGCGTACGCACGGCTCGGACGAGGAAGAGACCACGCAAAGTGGCAACCCGCGTCGGCATGCACTTACAGCTACGACCCGAAAGCGAAGACCTTCAACTTTTTTGTCGAATCAACTGGAACCCTACCGCCTGAGAAGTTGGTCCTAGACGCCGCCCGGCTCATCAGCGCGAAAACCTTGGGCTTCGAGGAAGGGCTCGGAGGAATCTCTGAAAGGTGA
PROTEIN sequence
Length: 212
MDIKLLTKEQDTIRFVLSDVSPAFANAVRRIILAEVPVMAIEDVMILENSSVMYDEILAHRLGLIPVTTDQSYNLPEECTCKSELGCEKCRASLSLEVEASDPVEVVYTSSLKPENPEVKPVSDKVPIVKLAQGQRIKLEAYARLGRGRDHAKWQPASACTYSYDPKAKTFNFFVESTGTLPPEKLVLDAARLISAKTLGFEEGLGGISER*