ggKbase home page

13_1_40cm_2_scaffold_17394_10

Organism: 13_1_40CM_2_Rokubacteria_68_13

partial RP 17 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: 7437..8654

Top 3 Functional Annotations

Value Algorithm Source
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 83.1
  • Coverage: 408.0
  • Bit_score: 693
  • Evalue 1.40e-196
Extracellular ligand-binding receptor id=2724781 bin=GWC2_Methylomirabilis_70_16 species=Rhodopseudomonas palustris genus=Rhodopseudomonas taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 80.8
  • Coverage: 401.0
  • Bit_score: 660
  • Evalue 1.20e-186
branched-chain amino acid ABC transporter, periplasmic binding protein similarity KEGG
DB: KEGG
  • Identity: 34.6
  • Coverage: 393.0
  • Bit_score: 221
  • Evalue 4.00e-55

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1218
ATGAAGATCGTGCTCACGGTGGTCGTCGCGGTCGCGGTGGTGATGGCCGGCGGCATCGGCTTCGCCCCGGCCCAGGGCCAGAAGGTCGTGAAGATCGGCGACCTCGGCTCGAAGGTCGGGGTGTTCGAGGGCTACGGCAAGTATCAGACGATGGGAATGACGCTGGCCGTCGAGGAGCTGAACGCCAAGGGCGGCGTCCTCGGCAACAAGATCGAGATCGTCTCCGAGGACGACGAGACCAAGCCGGCCCCGGCCGTCCGCAAGGCCGAGAAGCTCATCCTGCAGGACGACGTGAAGCTCCTGGTCGGCGCGGTCTCCTCGGGCGCGACCATGGCGATCATGGACGTGACCAAGAAGCACAAGACCGTGCACTGGAACTCTGTCTCCTGCGCCGAGTTCATGCGCACGACCAAGTTTCACAAGTACTACTTCAGCAACCAGCCGGACTCCCGCATGCAGTCCAACGGGCTGGCCAAGTACATCGTCGACAAGATGGGCCACAAGGTCTACATCTTCTACACCGACTACGCGATGGGCCAGTCGGACGGGCGCCAGTTCAAGACCGCGCTCGAGAGGCTGGGCGGCGAGGTCGTGGGCGTGGCCGGCGCGCCACTCGACACCAAGGACTTCAGCCCGTGGTTCGGCGCCATCAACGACTCCAAGCCCGAGGTCCTCTTCCTCGCGTTTGCCGGCACCGACTCGCTGCGGCTGATGACGCAGCTCCACTCCTTCGGCATGACCAAGAAATACAAGCTGGCCGGCATCGACTGCTTCCTCCTGCAACAGGACCTGCCCGCCATCGCCGAGCCGATGGAGGGCTTCGTCCAGCTCAATCACTTCTCCGCCTTCAACCCGGATCCGGCGATGCAGGCGTTCAACCAGAAGTTCAAGAAGCGCTGGAACCTCGACGCCAACATCGCGGCCGGCGCCTACGACGCGGTGCTCTTCTGGGCGGCGGCGGTGGAAAAGGCGAAGAGCTTCGATCCCGACAAGGTGGCCGAGGCGCACGAGGGGATGTGTCTCGACAACACGCACATCGGGCGCCAGTGCATCCGCAAGGACGATCACCAGGTCGTGATGGACATGCACCTCTACCAGGTCAAGGGCGGCAAGAACGTGCCCATCGCGCGCATCGCCGGCAGCGACTCGATCGGGGAGCCGATGGTGGGCAAGGATCCGGTGGCCGGGTTCACCTGGGAGATCAAGAAGAAGAACTAG
PROTEIN sequence
Length: 406
MKIVLTVVVAVAVVMAGGIGFAPAQGQKVVKIGDLGSKVGVFEGYGKYQTMGMTLAVEELNAKGGVLGNKIEIVSEDDETKPAPAVRKAEKLILQDDVKLLVGAVSSGATMAIMDVTKKHKTVHWNSVSCAEFMRTTKFHKYYFSNQPDSRMQSNGLAKYIVDKMGHKVYIFYTDYAMGQSDGRQFKTALERLGGEVVGVAGAPLDTKDFSPWFGAINDSKPEVLFLAFAGTDSLRLMTQLHSFGMTKKYKLAGIDCFLLQQDLPAIAEPMEGFVQLNHFSAFNPDPAMQAFNQKFKKRWNLDANIAAGAYDAVLFWAAAVEKAKSFDPDKVAEAHEGMCLDNTHIGRQCIRKDDHQVVMDMHLYQVKGGKNVPIARIAGSDSIGEPMVGKDPVAGFTWEIKKKN*