ggKbase home page

13_1_40cm_2_scaffold_55288_12

Organism: 13_1_40CM_2_Rokubacteria_68_13

partial RP 17 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: comp(9203..9949)

Top 3 Functional Annotations

Value Algorithm Source
dppB; peptide ABC transporter permease; K02033 peptide/nickel transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Deltaproteobacteria_57_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 51.2
  • Coverage: 248.0
  • Bit_score: 272
  • Evalue 4.60e-70
ABC transporter permease id=3677747 bin=GWF2_Methylomirabilis_70_14 species=Cupriavidus basilensis genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 246.0
  • Bit_score: 263
  • Evalue 2.60e-67
dipeptide/oligopeptide/nickel ABC transporter permease similarity KEGG
DB: KEGG
  • Identity: 49.8
  • Coverage: 235.0
  • Bit_score: 259
  • Evalue 1.40e-66

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Deltaproteobacteria_57_22 → Deltaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 747
CTCTGGCTGTGGCAGATGGTGAGCTTCCGTCCCGGCGACTCGATCTTCACCGGCGAGCCCATCGCCACGAGCTTGAAGAAATCCATCCCGGTGACGCTCGAGCTGGCCACGCTCGCGCTCATCCTCGGTCTGGTCATCGCGGTCCCGATCGGGATGCTGTCGGCGACCCGGCAGAACACGCCGGCGGACTACGCGGGACGCGTCGTCGCCGTCTCCGGGCTCTCGCTCCCCGATTTCTGGCTCGGCACGCTCGTGATCACCTTCGCCGCCATCTGGTTCCGCTGGATCCCGTCCATCGGCTACGTCAGCTTCTGGGAGTCGCCGACTAAAAACCTCCAGCAGTTCTTGCTGCCGGCGGCGGTGCTCGGGTTCCGCCTGTCGGCGGCCACCATGCGCATGACGCGCTCGACTGTCCTCGAAGTGCTCCGCGAGGACTACGTGCGCACGGCCCGGGCCAAGGGCCTCGAAGGCCGCATCGTCGTCTACAAGCACGCGCTCAAAAACGCGCTCATTCCCGTGGTCACGATCGTGGGTGGCCAGCTGGGAACGCTTCTGGCCGGAACGGTGATCGTGGAGACGATCTTCGCGCTGCCCGGGATGGGCCGCCTGACCGTGGAGGCGATTCTGTTCCGGGATTATCCCGTCGTGCAGACCAACGTCATGCTCGTGGCTGGCGCGCTGGTGAGCCTCAACCTCATGGTCGACCTCATGTACGCGTGGCTCGATCCGCGCATCCGGTACCACTGA
PROTEIN sequence
Length: 249
LWLWQMVSFRPGDSIFTGEPIATSLKKSIPVTLELATLALILGLVIAVPIGMLSATRQNTPADYAGRVVAVSGLSLPDFWLGTLVITFAAIWFRWIPSIGYVSFWESPTKNLQQFLLPAAVLGFRLSAATMRMTRSTVLEVLREDYVRTARAKGLEGRIVVYKHALKNALIPVVTIVGGQLGTLLAGTVIVETIFALPGMGRLTVEAILFRDYPVVQTNVMLVAGALVSLNLMVDLMYAWLDPRIRYH*