ggKbase home page

13_1_40cm_2_scaffold_5890_12

Organism: 13_1_40CM_2_Rokubacteria_68_13

partial RP 17 / 55 BSCG 16 / 51 ASCG 9 / 38
Location: 9542..11266

Top 3 Functional Annotations

Value Algorithm Source
putative hybrid sensor histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 38.8
  • Coverage: 560.0
  • Bit_score: 321
  • Evalue 2.00e-84
Putative Hybrid sensor histidine kinase id=2937937 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 47.3
  • Coverage: 353.0
  • Bit_score: 294
  • Evalue 1.90e-76
PAS sensor protein similarity KEGG
DB: KEGG
  • Identity: 28.4
  • Coverage: 416.0
  • Bit_score: 145
  • Evalue 4.00e-32

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 1725
ATGGGTGATCCCGAGGCGCGGATCGAGCGTCTTCGTCTGCTGGCCCGGCTCAATCAACGCATCTCCTCGTCGCTCGACTACGACGAGGCGCTCACCGCGATCGCCAGGGCGGCCAGCGAGATCATGGCGGTGCCGTCGGTGTCGGTGTGGGTGGCCGACGCGGAGACCAGCACGGTGACGGTGCGCGCCTTCTCCGACAATCGCCTCGGCAGCGGCTTCGATCCCAAGCCGATCGCGTTCGGCGAGCACGGAATCGGCTGGGTGGCGCTCCACCGCAAGCCGCTGCACGTGCCCGACATCCACGCGCCCGACTCGCCGGTCGGGCAGCGCGAGTGGTTTCGCGCCCGCGACTTGCACAGCGCGTACGCCGTGCCGATTCTCTTCCAGGACCAGATCCTGGGCGTGCTCTCGCTCACCCGGACCACACCGTTCGATCTCGACGACGACGACACCGAGCTGCTGGACAGCCTGGTGGCCCAGGCGGCGGTGGCGATCCGGAACGCGCGGCTGTTCGCGGGCAGCGAGACGCGCCGCCGCACGGCCGAGGCTCTGGCCGACCTCCTGCGCCTGCTCTCGCAGACCCTCGAGGTCGAGACGGTGGCGCAGCGGATCGCCGAAGACGTGCGCGATCTGCTCCACGTCGGAGCGGCCAGCGTCTACCACCTCGAGCCGGAGACCGACGACCTCGTGGTGATCGCCAGCTCGGTGTCGCCCGACAGCGCATTCGACTGGGTCCTCGTGCTGCCGCGCGGCTACGGGACGTGCGGGCTCGCCGTGCAGCAGAAGGCGCCGATCGCGTCGTCCGACGTGCTGGCCGATCCGCGCATCGTCTACAGCGAGGGCGCCCGCGAGCAGCTCCAGCGCACCGACTACCGCGCGGTGCTGGCCGTGCCCCTGCTCGTCCAGAACCGTCCGATCGGCGCCATCGCCGTCGCCGACGGCTTCGGCCGCGTCTTCAGCGAGACGGCGGTCCAGCTCCTCCAGGCGTTCGCCGACCAGGCCGCCGTCGCCCTCGAGCACGCCCGCCTCTACGACGAGGCCGAGCACCGCCGCCGCCAGGCCGAGGACACGGAAGAACGGCTGCGGGGACTGTTCGAGCGTGTGCCCGTCGGCATCTATCGGACGACGCCCGAGGGACGGATCCTCGACGTCAACCGGGCGCTGATCACGATGCTCGGCTATCCGGATCGCGCGACCCTGCTGGCCATGAACGCGACCGACGTCTACGCGCGTGTGGAGGATCGCCAGCGCTGGCGGAGCACGATCGAGCGGGACGGCGTGATCCGCGACATGGAGGTGGAGCTGCGTCGTCACGACGGAAGCGTCATCTCGGCGCGCGAGAGCGCCCGGGCCGTCTGCGCGGCCAGCGGGCGCGTGCTGCACTACGAGGGCACGCTGGAGGACGTCACCGAGCGCAAGCGCGCCGAGATCGCTCAGCGCCAGGCGGAGGCCTTGCGCTCGGTCACCGAGCTGGCCAACGCGGCGGCCCACGAGATCAACAATCCGCTGCTCGTCATCACCGGCAACCTCGAGCTCATGGCCCGCCGTCTCGGCCCCGACGATCCCAACCGCGACTCGATCCAGCGCACGCTCGAGGCCTGCCAGCGGATCAGCGAGATGGTGCAGCACATGGGCAAGATCACGCGCCTCGAAGTCCGTAACGAGTGGCCGGGGCTGTCGGCCATCCTCGACCTCAAGAAGTCGGCGGACGCCGGCGAGGGTTAG
PROTEIN sequence
Length: 575
MGDPEARIERLRLLARLNQRISSSLDYDEALTAIARAASEIMAVPSVSVWVADAETSTVTVRAFSDNRLGSGFDPKPIAFGEHGIGWVALHRKPLHVPDIHAPDSPVGQREWFRARDLHSAYAVPILFQDQILGVLSLTRTTPFDLDDDDTELLDSLVAQAAVAIRNARLFAGSETRRRTAEALADLLRLLSQTLEVETVAQRIAEDVRDLLHVGAASVYHLEPETDDLVVIASSVSPDSAFDWVLVLPRGYGTCGLAVQQKAPIASSDVLADPRIVYSEGAREQLQRTDYRAVLAVPLLVQNRPIGAIAVADGFGRVFSETAVQLLQAFADQAAVALEHARLYDEAEHRRRQAEDTEERLRGLFERVPVGIYRTTPEGRILDVNRALITMLGYPDRATLLAMNATDVYARVEDRQRWRSTIERDGVIRDMEVELRRHDGSVISARESARAVCAASGRVLHYEGTLEDVTERKRAEIAQRQAEALRSVTELANAAAHEINNPLLVITGNLELMARRLGPDDPNRDSIQRTLEACQRISEMVQHMGKITRLEVRNEWPGLSAILDLKKSADAGEG*