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13_1_40cm_2_scaffold_5308_8

Organism: 13_1_40CM_2_Acidobacteria_68_10

partial RP 40 / 55 MC: 1 BSCG 39 / 51 ASCG 9 / 38
Location: 9526..10092

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 40.7
  • Coverage: 189.0
  • Bit_score: 150
  • Evalue 2.00e-33
RNA polymerase, sigma-24 subunit, RpoE similarity KEGG
DB: KEGG
  • Identity: 36.6
  • Coverage: 191.0
  • Bit_score: 132
  • Evalue 1.50e-28
RNA polymerase sigma-E factor id=1709623 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 39.8
  • Coverage: 181.0
  • Bit_score: 132
  • Evalue 5.30e-28

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Taxonomy

R_Gammaproteobacteria_57_10 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGCTGCTGGACGACGCGACGCTCCTGGAACGCTGCCGGCAGGGGGATGACCTCGCCTGGGAGGCGCTTGTGCGCCGTTTCCAGGGGCGCGTCTACTCGGTCGCCTGCCACTACATGCGCAACGCCGAGGAGGCGAGGGACGTGGCGCAGGAGGTCTTTGTCCGGATCTACGAGCGCCTGGAAGCCTTCCACGGGGACCAGGCGTTCCTGCCATGGGTGCTGCGCCTGTCGCGCAACATCTGCATCGACACGCTGAGACGGCAGAAGGGGCGTCCGCGCGCGACCGAAGCCGACGTCGACCCTACGGCGCAGCTCGCCTCGCCGGCGCGGACGCCGGAGGAGGCCTCCGCGGCGCGTTCGGCGGGGGACCTGCTCTATCGGGCGATGGACCGGATGAGCGACGCCGACCGGGAAATCCTCATGCTGAAGGAGATCCAGGGGTTGAAGGTGGAGGAGATCGCTCTCCTTCTGAAAGTGCCGACCGGGACGGTCAAATCACGCTGCAACCGGGCGCGGCTCGATCTCGCCGAGCGGGTGCGGCGGCTCGATCCGTCGTACGGAGCGTAA
PROTEIN sequence
Length: 189
VLLDDATLLERCRQGDDLAWEALVRRFQGRVYSVACHYMRNAEEARDVAQEVFVRIYERLEAFHGDQAFLPWVLRLSRNICIDTLRRQKGRPRATEADVDPTAQLASPARTPEEASAARSAGDLLYRAMDRMSDADREILMLKEIQGLKVEEIALLLKVPTGTVKSRCNRARLDLAERVRRLDPSYGA*