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13_1_20cm_2_scaffold_1993_5

Organism: 13_1_20CM_2_Acidobacteria_65_9

partial RP 12 / 55 MC: 1 BSCG 12 / 51 ASCG 7 / 38
Location: 5031..6758

Top 3 Functional Annotations

Value Algorithm Source
General secretory pathway protein E n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HQ24_9FIRM alias=16ft_combo_ws3_scaffold_92_92 id=5225868 tax=16ft_combo_ws3 species=Thermosinus carboxydivorans Nor1 genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes similarity UNIREF
DB: UNIREF100
  • Identity: 45.3
  • Coverage: 497.0
  • Bit_score: 448
  • Evalue 1.00e-122
type II secretion system protein E (GspE); K02652 type IV pilus assembly protein PilB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 565.0
  • Bit_score: 945
  • Evalue 4.80e-272
type II secretion system protein E (GspE) similarity KEGG
DB: KEGG
  • Identity: 50.1
  • Coverage: 415.0
  • Bit_score: 416
  • Evalue 1.20e-113

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Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_66_10_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1728
GTGCATCGCCGTCACGCTCGAGAAGAATCTGCTCACAGTCGCGATGTCCGACCCGAGACGGGCCACCGCATCAAGCAAGTCGTCGCGACGCGCGGTGACATCATCGACGCCATTCAGACGCAGTATCCCGACAAAGCGCTCGCGGTGCGGACCGCCACTCCGACCGGCGGCGAGCTTGCGGTCACGACGCCTCCGGGGTCGGCCCGGCGTCCCGGCGACGCGTCATCGGGCGACACGGCACTCACACGCCGGCCCGAAGAGGAGGTCTTCGAGTCGCCGGTGGCCGGGCTCAAGGCCAGCAGCGAGGCGGCGCCGATCATCGATTTGGTCGACCTCGTCGTGAAGAGCGCCATCAAGAGCAAGGCGAGCGACATTCACGTCGAGCCGATGGAGAAGGGCGTTCTCATCCGGCATCGTCTCGACGGCCTGCTGAAAGAAGTGATGGACCTTCCGAAATGGGTCCACGAAGGGCTGATCGCGCGGCTCAAGATCATGGCCGGCATGGACATCGCCGAGAAGCGGCTGCCGCAGGACGGGCGTCTGCGATCGACGGCCGAGGACGGCACCGAAGTCGACTTCCGGGTCTCGACCCTTCGCACGCTGTACGGCGAGAAAGTCGTCATGCGCGTGCTTGATCATCGCAAGGGCGTGCCCGTGCTCGAAGAGATCGGCATGTCGGCGACGTCGCTCGAAGAGGTCCGCGTTTTTCTGCGTCATCAGCACGGGATGATCCTCGTCGTCGGCCCCACCGGCAGCGGTAAGTCGACAACGCTGAGCTCCGCGCTGAAGTCGGTGCAGTCGGAGAAGACCAACATCATCACGATCGAAGATCCGGTCGAGTACCAGATCCCGGGCGTGAATCAGACGCAGATCAACGAGAAGATCAAGCTGACGGTCGCCAGCGCGCTGCGATCGATTCTGCGCCAGGATCCCGACGTCATCCTCGTCGGGGAAATCCGCGACGCGGAGACGGCGAAGATCGCGATGCAGGCCGCGCAGACCGGCCACCTCGTGCTCTCCACGCTGCACACCGACGATGCGCCGTCGGTCGTCACGCGGTTGATGGATATCGGCACGGAGCCCTACGTCATCGCCGGCGCGATTATCGGCGTCGTCGCGCAACGCCTCGTGCGGCGGTTGTGCGTCCATTGCCGCCGCCAGTACACGCCGCCAGCGGAAACGCTCCGGGCGCTGAACATCGCCGACGCGGACGCGGCGACCATTCCGTTCTACAAATCAGTGGGCTGCGATCAGTGCAACCACACCGGTTACCGCGGACGCATCGGCCTGTACGAGGTGATGCGCATCACCGACAAGCTGCGCCGGTTGATCGCGTCGCGGGCGCCGGAGGACCAGGTTCGCGAAGCGGCGATCGGCGGCGGCATGATCACGCTCGGCGAAGACGGCCTCGCGAAAGTGAAGAGCGGCATCACCACACCCGAAGAGCTGTTGCGCGTGGTGACCGAAGTGCGAGAGATGCGGACGCTGTGTCCCGGCTGCGGCGCGGCGGTTGGTGTCGATTTCCTCGCCTGCCCGCAGTGCGGCAAACGTCTCGGATCCGGGTGCCCGCATTGTGGCCGCGCGCTGCAGCCCGGCTGGAATTTCTGCCCGTACTGCGCAAAGAGCACGACCGAGTCGAAGCGCGCCCCGAAACGGCTCAAGGAGCGCGAGGTGACGGAAGGCCGGCGTGAGCTGCCGGCGGCCAACATCGCGGAGTTCAAGAAGTAG
PROTEIN sequence
Length: 576
VHRRHAREESAHSRDVRPETGHRIKQVVATRGDIIDAIQTQYPDKALAVRTATPTGGELAVTTPPGSARRPGDASSGDTALTRRPEEEVFESPVAGLKASSEAAPIIDLVDLVVKSAIKSKASDIHVEPMEKGVLIRHRLDGLLKEVMDLPKWVHEGLIARLKIMAGMDIAEKRLPQDGRLRSTAEDGTEVDFRVSTLRTLYGEKVVMRVLDHRKGVPVLEEIGMSATSLEEVRVFLRHQHGMILVVGPTGSGKSTTLSSALKSVQSEKTNIITIEDPVEYQIPGVNQTQINEKIKLTVASALRSILRQDPDVILVGEIRDAETAKIAMQAAQTGHLVLSTLHTDDAPSVVTRLMDIGTEPYVIAGAIIGVVAQRLVRRLCVHCRRQYTPPAETLRALNIADADAATIPFYKSVGCDQCNHTGYRGRIGLYEVMRITDKLRRLIASRAPEDQVREAAIGGGMITLGEDGLAKVKSGITTPEELLRVVTEVREMRTLCPGCGAAVGVDFLACPQCGKRLGSGCPHCGRALQPGWNFCPYCAKSTTESKRAPKRLKEREVTEGRRELPAANIAEFKK*