ggKbase home page

13_1_20cm_2_scaffold_3181_9

Organism: 13_1_20CM_2_Acidobacteria_65_9

partial RP 12 / 55 MC: 1 BSCG 12 / 51 ASCG 7 / 38
Location: comp(8708..10468)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 interaction domain protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LHS4_CHLTF similarity UNIREF
DB: UNIREF100
  • Identity: 39.7
  • Coverage: 478.0
  • Bit_score: 312
  • Evalue 1.10e-81
sigma-54 interaction domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated UNIPROT
DB: UniProtKB
  • Identity: 61.6
  • Coverage: 437.0
  • Bit_score: 529
  • Evalue 8.50e-147
sigma-54 interaction domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 39.7
  • Coverage: 478.0
  • Bit_score: 312
  • Evalue 3.30e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1761
GCTCGCCAAGGAAATACGGAACTTGCACTAACCCAGGCTGATCTCCTGCTACGTCTTGCCGAAAGCTCTGGTGACGATCTACTCGCCCGCATTGCAACACTGCTGAGGGCTGAACTGCTTCAAGAAGTGGGACGTGTAGCGGAGTCGCTGACAGCAGTGAACGGCGTGATTCCACATCTCCCTAGTAGCCCGCCGGATCTGTACGCTCATTATGAGCGACTTGTGACGATGGCATTGGCGCGCACCGGTGACTTCGCCGGCGCTCTCTTCCATCGCGCTCGGGCCGCAAGGATTCGCGAATCGTCGAGTACAACTTACGAACCTCTTCGCCCGACACCGATTCCAGAACTGGAGACCTTTTCCGAATCTGTAAGTCCAACCTTGGTAAAAGAAGCCAAATTGCGCTCGTCGGTCGCCGCGGTGTTTCAAGGTATAAGTGCGCTGCTCGCCTTGGGGAATAATTTCGAACTGACGGCCCGTGAGCTGCTCGAATTGTTTGAGCAGACGGATAGCGTGTACGCCGCGAGAGCGATCCGCCGCGCTCCGGACGGAATCGAACACGAGTTAGCACGCAAAGGCGAGAGCGGAGCAATTGTTGAGGAAGATGAGCGACGCATTCCAATCGGTCAGCGCCAAGGCGTCGACATCGAACTCATCATTCGGCCGAAACACGATGTCGAATCCACTGCGATGGTCAACGCCACGACGCTGCTACTCTCGAGTCTTAAAGAAGTGCAGCGCGCGCGCGCTGAACGCGAAGAGCGGTCCACGCTATGGCCGGCGGAAGAACTCCCCGTGGAAAACGGGCACGCCATCATCGCTGGCCACATGCGCGAACTGATGATGGTGGTTCAGCGCGTCGCGCGCGCGAACATCAGCGTCCTCATCTCCGGCGAGAGCGGGACCGGCAAGGAGATCATCGCCCGCGCGATCCACGACTGCTCCGACCGCGCGCAGAAGGCGTTCGTCCCCGTCAACTGCGCCTCGGTGCCGCGCGAGCTGATGGAGAGCCAGCTGTTCGGCCACCGCCGCGGCGCTTTCACCGGCGCCGACCGCGACTACGCCGGCTTCATCCGCGCCGCCAGCGGCGGCACCCTCTTCCTCGACGAAGTCGGCGAGCTGAGCCTCGACCTCCAGCCCAAGCTGCTCCGCTTCCTCGAGTCGGGCGAGATCGCGCCGCTCGGCGAACCGGCACCCCTGACCGTGAACGTCCGCGTCCTCGCCGCCACCAACAAGAACCTCGAAGAGCTCGTGCGCGAAGGCAAGTTCCGCGAGGATCTCTTCTACCGCTTGAACGTCGTCCCGCTGACGATTCGCCCGCTGCGCGAACGCCGCGACGAAATCCCCAGGCTCGTGCAGCATTTCGTCGACCGCGCCGCGGTCCAGTTCAAGAAGGGCCACCTCACCGTCGCCGAGGAAACGATGGAGCGGCTGCTGCTGTACCGGTGGCCGGGCAACGTCCGTCAACTACAGCACGAGCTGCAACGCATCGTCGCGCTCGCGGAACCGAGCTCGACGCTCCTGCCCGACATGATCTCGGAGGAGATCCTCGGCGCGCTGCCGCTGCTCCGCCCTATCCCGGCCGGCCGCGAGATGGCCGTCTCGCTGAACGAAAAGCTCCCGTCGGCCATCGCGCGCATCGAGTGCGAGATGATCAAAGTCGCGCTGCGCGACAACCGCGGAAAAGTCGACGCCGCGGCCAAGGCCCTTGGCATCTCGCGTAAGGGGCTGTACCTCAAACGCCAGCGCCTCGGCCTGTAG
PROTEIN sequence
Length: 587
ARQGNTELALTQADLLLRLAESSGDDLLARIATLLRAELLQEVGRVAESLTAVNGVIPHLPSSPPDLYAHYERLVTMALARTGDFAGALFHRARAARIRESSSTTYEPLRPTPIPELETFSESVSPTLVKEAKLRSSVAAVFQGISALLALGNNFELTARELLELFEQTDSVYAARAIRRAPDGIEHELARKGESGAIVEEDERRIPIGQRQGVDIELIIRPKHDVESTAMVNATTLLLSSLKEVQRARAEREERSTLWPAEELPVENGHAIIAGHMRELMMVVQRVARANISVLISGESGTGKEIIARAIHDCSDRAQKAFVPVNCASVPRELMESQLFGHRRGAFTGADRDYAGFIRAASGGTLFLDEVGELSLDLQPKLLRFLESGEIAPLGEPAPLTVNVRVLAATNKNLEELVREGKFREDLFYRLNVVPLTIRPLRERRDEIPRLVQHFVDRAAVQFKKGHLTVAEETMERLLLYRWPGNVRQLQHELQRIVALAEPSSTLLPDMISEEILGALPLLRPIPAGREMAVSLNEKLPSAIARIECEMIKVALRDNRGKVDAAAKALGISRKGLYLKRQRLGL*