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13_1_20cm_2_scaffold_4355_4

Organism: 13_1_20CM_2_Acidobacteria_60_10

partial RP 32 / 55 BSCG 36 / 51 ASCG 10 / 38 MC: 1
Location: comp(2298..3668)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCQ3_9BACT similarity UNIREF
DB: UNIREF100
  • Identity: 52.2
  • Coverage: 458.0
  • Bit_score: 460
  • Evalue 1.50e-126
Response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains {ECO:0000313|EMBL:CDM66685.1}; TaxID=454194 species="Bacteria; Acidobacteria; Acidobacteria subdivision 4; Pyrinomo UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 455.0
  • Bit_score: 463
  • Evalue 2.60e-127
sigma-54 dependent DNA-binding response regulator similarity KEGG
DB: KEGG
  • Identity: 52.2
  • Coverage: 458.0
  • Bit_score: 460
  • Evalue 4.40e-127

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Taxonomy

Pyrinomonas methylaliphatogenes → Pyrinomonas → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 1371
ATGGATACATCTCGGGCTGTTAACATTCTCGTCGTGGATGACGACCGGGAGACCCGCGATTTGCTCGGAGAAGTGCTGGGCGAGGAGGAGTATCACGTTGTCACTTCCGGCAGCGGCGAAGAGGCGCTCGAGATCGGCAAGCAGGAATGCTTTGACGTCATCATCAGCGATATGCGCCTCGGACCCAAGCTGAACGGTCTCGACGTCTTGAGGGCTTACAAGACGATCCAGCCCGGGTCCGAAGTTATTTTGATCACCGCCTTCGGGTCCATGGAGAGCGCCATTGAAGCGGTCAAAGCGGGGGCCTTCGACTATCTTTCGAAGCCTTTCAAAATCGACGAAGTCCTGCTGAAAGTGAAGCAGGCTCTTGAAAACGGCCGCCTGATCCGCGAGAACCGCAGCCTGAAGCAGCAACTGGAAAGCCAGGTGCAGCTCTCGAGCCTCGTCGGCCGCAGCCCCCGGATGCTCGAGCTGTACAAGAAGATTGCCATGGTCTCCGACTCGCGCTCGACGGTGCTGATCTACGGGGCGAGCGGAACAGGAAAGGAACTTGTCGCCAAGGCGATCCATCACAACGGCCCTCGCGCGAACCAGCTCTTTTTTGCCGTGAATTGCGGCGCCCTGACGGAAACTTTGCTCGAGAGCGAGCTCTTCGGTCACGTTCGCGGCTCTTTCACCGGGGCCATCGGGAACAAGCGCGGCATCTTTGAAGAAGCGAGCGGTGGCACGGTGTTCCTGGACGAAGTCAGCGAAATGAGCCCCGCGCTCCAGGTGAAAGTGCTCCGGGTGATGGAAGAGCAGGAAATCCGGCGCATCGGCAGCAACCCGGTGATTAAAGTGGACGTGCGCATCATCGCCTCGAGCAATCGCAAGCTGGGCGAACTGGTGGAGCAGGGCACCTTCCGCGAGGACCTTTACTATCGCCTCCGGGTCATCGAGATAGAACTTCCGTCTTTGCGCGAGCGCGCGGAAGATATCCCGTTGCTGGTCGAGCACTTCCTCAACAAGTTCGGCCAGGAGCGTGGCCAGAATCATTCGATTTCCCAGGGGGCCCTCTCCGTGCTGCTCAGCTACCCGTGGCCGGGAAACGTCCGGGAACTGGAAAATGCCATCGAATCGGCCGTGGCGCTGAATCGCTCCGGGGTGATCATGCCGGAGGACTTGCCGCCCAAAGTGCGGGCGGAATCGCGGGATGGCGACCAGCCCGCGGACTTGTATGCCAACCTGCCCTCTCTCGACGAACTCGAGAAGAGGTATCTCGCTCATGTCCTCAAGGTCACGGGCGAAAACAAGGCCAGGACGGCCGAAATCCTGGGAATCAGCCGCAGGACCCTTTACCGCATGGCCGAGAGGTTCAGTCTCCCGATTTGA
PROTEIN sequence
Length: 457
MDTSRAVNILVVDDDRETRDLLGEVLGEEEYHVVTSGSGEEALEIGKQECFDVIISDMRLGPKLNGLDVLRAYKTIQPGSEVILITAFGSMESAIEAVKAGAFDYLSKPFKIDEVLLKVKQALENGRLIRENRSLKQQLESQVQLSSLVGRSPRMLELYKKIAMVSDSRSTVLIYGASGTGKELVAKAIHHNGPRANQLFFAVNCGALTETLLESELFGHVRGSFTGAIGNKRGIFEEASGGTVFLDEVSEMSPALQVKVLRVMEEQEIRRIGSNPVIKVDVRIIASSNRKLGELVEQGTFREDLYYRLRVIEIELPSLRERAEDIPLLVEHFLNKFGQERGQNHSISQGALSVLLSYPWPGNVRELENAIESAVALNRSGVIMPEDLPPKVRAESRDGDQPADLYANLPSLDELEKRYLAHVLKVTGENKARTAEILGISRRTLYRMAERFSLPI*