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13_1_20cm_2_scaffold_2933_3

Organism: 13_1_20CM_2_Acidobacteria_68_7

partial RP 12 / 55 MC: 1 BSCG 11 / 51 ASCG 4 / 38 MC: 1
Location: comp(1530..1868)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein Hfq n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NTP0_GRAMM similarity UNIREF
DB: UNIREF100
  • Identity: 43.7
  • Coverage: 87.0
  • Bit_score: 76
  • Evalue 1.60e-11
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=682795 species="Bacteria; Acidobacteria; Acidobacteriales; Acidobacteriaceae; Granulicella.;" source="Gr UNIPROT
DB: UniProtKB
  • Identity: 43.7
  • Coverage: 87.0
  • Bit_score: 76
  • Evalue 2.20e-11
RNA chaperone Hfq similarity KEGG
DB: KEGG
  • Identity: 43.7
  • Coverage: 87.0
  • Bit_score: 76
  • Evalue 4.40e-12

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Taxonomy

Granulicella mallensis → Granulicella → Acidobacteriales → Acidobacteriia → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 339
ATGGACAAAGACGAGGGCGGCACCAACATCCAGGATCAGTATCTCGGCAAGGCGCGCAAGGACCGATCGTGGCTGACGGTGGTCCTGAACAACGGCAAGAAGATCAACGGGCGGATCGTCTCTTTCGACCGCTACACCGTCATCCTGGAAGACCGCGGCAGCCAGCAGATGGTGTTCAAGCACGCCATCGCGACGGTCAGCGCGGCCCGGTCGTTCTCGAACACGATCGCGCTCGCCGAGGCACGGCCTCCCGACAGGCGCGGCGGGGACGCACCGGAGGTCGGGCCGCGTGCCGGGGACACGCCCGAGGATCCGGACCGATCGCGATCCGGGCCCTGA
PROTEIN sequence
Length: 113
MDKDEGGTNIQDQYLGKARKDRSWLTVVLNNGKKINGRIVSFDRYTVILEDRGSQQMVFKHAIATVSAARSFSNTIALAEARPPDRRGGDAPEVGPRAGDTPEDPDRSRSGP*